Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS4P35443 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS4P35443 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.31■□□□□ 0.36
THBS4P35443 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
THBS4P35443 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS4P35443 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.3■□□□□ 0.36
THBS4P35443 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 KRT17P3-201ENST00000420566 1262 ntBASIC17.3■□□□□ 0.36
THBS4P35443 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS4P35443 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
THBS4P35443 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.3■□□□□ 0.36
THBS4P35443 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.3■□□□□ 0.36
THBS4P35443 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
THBS4P35443 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS4P35443 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS4P35443 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS4P35443 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS4P35443 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
THBS4P35443 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
THBS4P35443 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.29■□□□□ 0.36
THBS4P35443 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.29■□□□□ 0.36
THBS4P35443 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.29■□□□□ 0.36
THBS4P35443 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.29■□□□□ 0.36
THBS4P35443 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.29■□□□□ 0.36
THBS4P35443 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.29■□□□□ 0.36
THBS4P35443 AC125437.2-201ENST00000625180 2167 ntBASIC17.29■□□□□ 0.36
THBS4P35443 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.29■□□□□ 0.36
THBS4P35443 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THBS4P35443 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
THBS4P35443 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS4P35443 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS4P35443 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
THBS4P35443 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.28■□□□□ 0.36
THBS4P35443 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.28■□□□□ 0.36
THBS4P35443 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS4P35443 AC023632.3-201ENST00000521633 145 ntBASIC17.28■□□□□ 0.36
THBS4P35443 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.28■□□□□ 0.36
THBS4P35443 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.28■□□□□ 0.36
THBS4P35443 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.28■□□□□ 0.36
THBS4P35443 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THBS4P35443 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.28■□□□□ 0.36
THBS4P35443 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS4P35443 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS4P35443 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
THBS4P35443 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.27■□□□□ 0.36
THBS4P35443 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS4P35443 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
THBS4P35443 POM121L13P-201ENST00000422362 380 ntBASIC17.27■□□□□ 0.36
THBS4P35443 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.27■□□□□ 0.36
THBS4P35443 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS4P35443 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THBS4P35443 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
THBS4P35443 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.27■□□□□ 0.36
THBS4P35443 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.27■□□□□ 0.36
THBS4P35443 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms