Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CKS2P33552 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.46□□□□□ -0.09
CKS2P33552 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CKS2P33552 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.46□□□□□ -0.09
CKS2P33552 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CKS2P33552 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.46□□□□□ -0.09
CKS2P33552 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.46□□□□□ -0.09
CKS2P33552 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS2P33552 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.46□□□□□ -0.1
CKS2P33552 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.46□□□□□ -0.1
CKS2P33552 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CKS2P33552 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CKS2P33552 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKS2P33552 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
CKS2P33552 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.46□□□□□ -0.1
CKS2P33552 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKS2P33552 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.46□□□□□ -0.1
CKS2P33552 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKS2P33552 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CKS2P33552 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 BX842568.3-201ENST00000418104 571 ntBASIC14.45□□□□□ -0.1
CKS2P33552 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.45□□□□□ -0.1
CKS2P33552 AC126544.1-201ENST00000580842 1059 ntBASIC14.45□□□□□ -0.1
CKS2P33552 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.45□□□□□ -0.1
CKS2P33552 AC105233.4-201ENST00000642045 216 ntBASIC14.45□□□□□ -0.1
CKS2P33552 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.45□□□□□ -0.1
CKS2P33552 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.45□□□□□ -0.1
CKS2P33552 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CKS2P33552 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS2P33552 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.45□□□□□ -0.1
CKS2P33552 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS2P33552 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CKS2P33552 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CKS2P33552 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS2P33552 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CKS2P33552 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.44□□□□□ -0.1
CKS2P33552 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms