Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.13■□□□□ 0.65
EPHA3P29320 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
EPHA3P29320 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EPHA3P29320 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.13■□□□□ 0.65
EPHA3P29320 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
EPHA3P29320 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
EPHA3P29320 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
EPHA3P29320 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.12■□□□□ 0.65
EPHA3P29320 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.12■□□□□ 0.65
EPHA3P29320 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.12■□□□□ 0.65
EPHA3P29320 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
EPHA3P29320 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.12■□□□□ 0.65
EPHA3P29320 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.12■□□□□ 0.65
EPHA3P29320 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.12■□□□□ 0.65
EPHA3P29320 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.12■□□□□ 0.65
EPHA3P29320 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.12■□□□□ 0.65
EPHA3P29320 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
EPHA3P29320 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
EPHA3P29320 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
EPHA3P29320 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
EPHA3P29320 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 AL162412.1-201ENST00000567129 965 ntBASIC19.11■□□□□ 0.65
EPHA3P29320 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.11■□□□□ 0.65
EPHA3P29320 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
EPHA3P29320 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
EPHA3P29320 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
EPHA3P29320 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
EPHA3P29320 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 AIRN-201ENST00000601203 4374 ntBASIC19.1■□□□□ 0.65
EPHA3P29320 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 MIR638-201ENST00000385237 100 ntBASIC19.1■□□□□ 0.65
EPHA3P29320 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
EPHA3P29320 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
EPHA3P29320 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.1■□□□□ 0.65
EPHA3P29320 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.1■□□□□ 0.65
EPHA3P29320 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
EPHA3P29320 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
EPHA3P29320 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.1■□□□□ 0.65
EPHA3P29320 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
EPHA3P29320 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
EPHA3P29320 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.1■□□□□ 0.65
EPHA3P29320 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.09■□□□□ 0.65
EPHA3P29320 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 LETM1P2-201ENST00000597330 2178 ntBASIC19.09■□□□□ 0.65
EPHA3P29320 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA3P29320 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 MCRIP2P1-201ENST00000394346 511 ntBASIC19.09■□□□□ 0.65
EPHA3P29320 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.09■□□□□ 0.65
EPHA3P29320 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.09■□□□□ 0.65
EPHA3P29320 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
EPHA3P29320 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 AC020763.4-201ENST00000623414 4170 ntBASIC19.09■□□□□ 0.65
EPHA3P29320 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 PHGDH-210ENST00000641115 1638 ntBASIC19.09■□□□□ 0.65
EPHA3P29320 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
EPHA3P29320 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
EPHA3P29320 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
EPHA3P29320 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms