Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNA2P20248 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCNA2P20248 AC007613.1-201ENST00000572811 2597 ntBASIC18.5■□□□□ 0.55
CCNA2P20248 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.5■□□□□ 0.55
CCNA2P20248 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCNA2P20248 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.5■□□□□ 0.55
CCNA2P20248 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.5■□□□□ 0.55
CCNA2P20248 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.5■□□□□ 0.55
CCNA2P20248 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.5■□□□□ 0.55
CCNA2P20248 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.5■□□□□ 0.55
CCNA2P20248 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.5■□□□□ 0.55
CCNA2P20248 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.5■□□□□ 0.55
CCNA2P20248 AC073111.5-205ENST00000641717 521 ntBASIC18.5■□□□□ 0.55
CCNA2P20248 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.5■□□□□ 0.55
CCNA2P20248 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCNA2P20248 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCNA2P20248 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.5■□□□□ 0.55
CCNA2P20248 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
CCNA2P20248 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.49■□□□□ 0.55
CCNA2P20248 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CCNA2P20248 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.49■□□□□ 0.55
CCNA2P20248 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CCNA2P20248 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCNA2P20248 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCNA2P20248 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCNA2P20248 CYP2T1P-201ENST00000432607 1285 ntBASIC18.49■□□□□ 0.55
CCNA2P20248 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.49■□□□□ 0.55
CCNA2P20248 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.49■□□□□ 0.55
CCNA2P20248 FAM21FP-204ENST00000608637 956 ntBASIC18.49■□□□□ 0.55
CCNA2P20248 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCNA2P20248 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCNA2P20248 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCNA2P20248 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCNA2P20248 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCNA2P20248 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.49■□□□□ 0.55
CCNA2P20248 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCNA2P20248 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.49■□□□□ 0.55
CCNA2P20248 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.49■□□□□ 0.55
CCNA2P20248 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.49■□□□□ 0.55
CCNA2P20248 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCNA2P20248 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
CCNA2P20248 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 AC092720.2-201ENST00000602388 1665 ntBASIC18.48■□□□□ 0.55
CCNA2P20248 HCG11-201ENST00000411553 5696 ntBASIC18.48■□□□□ 0.55
CCNA2P20248 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCNA2P20248 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 AC005181.1-201ENST00000604782 1256 ntBASIC18.48■□□□□ 0.55
CCNA2P20248 AC008694.1-202ENST00000636953 945 ntBASIC18.48■□□□□ 0.55
CCNA2P20248 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CCNA2P20248 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCNA2P20248 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.47■□□□□ 0.55
CCNA2P20248 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.47■□□□□ 0.55
CCNA2P20248 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCNA2P20248 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.47■□□□□ 0.55
CCNA2P20248 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.47■□□□□ 0.55
CCNA2P20248 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 RARRES2P4-201ENST00000514074 484 ntBASIC18.47■□□□□ 0.55
CCNA2P20248 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.47■□□□□ 0.55
CCNA2P20248 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.47■□□□□ 0.55
CCNA2P20248 AC069236.1-201ENST00000604339 616 ntBASIC18.47■□□□□ 0.55
CCNA2P20248 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.47■□□□□ 0.55
CCNA2P20248 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.47■□□□□ 0.55
CCNA2P20248 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.47■□□□□ 0.55
CCNA2P20248 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.47■□□□□ 0.55
CCNA2P20248 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCNA2P20248 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms