Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
VCLP18206 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VCLP18206 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.75■□□□□ 0.75
VCLP18206 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 ABHD17AP1-201ENST00000358206 933 ntBASIC19.75■□□□□ 0.75
VCLP18206 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.75■□□□□ 0.75
VCLP18206 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.75■□□□□ 0.75
VCLP18206 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.75■□□□□ 0.75
VCLP18206 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.75■□□□□ 0.75
VCLP18206 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.75■□□□□ 0.75
VCLP18206 AC112907.3-201ENST00000577781 2400 ntBASIC19.75■□□□□ 0.75
VCLP18206 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
VCLP18206 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCLP18206 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VCLP18206 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.75■□□□□ 0.75
VCLP18206 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VCLP18206 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
VCLP18206 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.74■□□□□ 0.75
VCLP18206 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VCLP18206 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.74■□□□□ 0.75
VCLP18206 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.74■□□□□ 0.75
VCLP18206 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.74■□□□□ 0.75
VCLP18206 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VCLP18206 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCLP18206 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VCLP18206 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.73■□□□□ 0.75
VCLP18206 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.73■□□□□ 0.75
VCLP18206 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
VCLP18206 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.73■□□□□ 0.75
VCLP18206 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VCLP18206 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.73■□□□□ 0.75
VCLP18206 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
VCLP18206 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VCLP18206 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.73■□□□□ 0.75
VCLP18206 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCLP18206 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.72■□□□□ 0.75
VCLP18206 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.72■□□□□ 0.75
VCLP18206 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
VCLP18206 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VCLP18206 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VCLP18206 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
VCLP18206 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.72■□□□□ 0.75
VCLP18206 KRT18P29-201ENST00000397031 1267 ntBASIC19.72■□□□□ 0.75
VCLP18206 KRT17P3-201ENST00000420566 1262 ntBASIC19.72■□□□□ 0.75
VCLP18206 KRT8P20-201ENST00000423953 1409 ntBASIC19.72■□□□□ 0.75
VCLP18206 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.72■□□□□ 0.75
VCLP18206 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.72■□□□□ 0.75
VCLP18206 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.72■□□□□ 0.75
VCLP18206 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
VCLP18206 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCLP18206 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.71■□□□□ 0.75
VCLP18206 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VCLP18206 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms