Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SOX15-203ENST00000570788 1093 ntBASIC17.64■□□□□ 0.41
HLA-DOBP13765 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HLA-DOBP13765 AC116351.2-201ENST00000606540 1585 ntBASIC17.64■□□□□ 0.41
HLA-DOBP13765 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DOBP13765 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOBP13765 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DOBP13765 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOBP13765 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOBP13765 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DOBP13765 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DOBP13765 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DOBP13765 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HLA-DOBP13765 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DOBP13765 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DOBP13765 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DOBP13765 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DOBP13765 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DOBP13765 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HLA-DOBP13765 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-DOBP13765 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
HLA-DOBP13765 AC116562.4-201ENST00000641316 2276 ntBASIC17.61■□□□□ 0.41
HLA-DOBP13765 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 TFP1-202ENST00000475455 1573 ntBASIC17.61■□□□□ 0.41
HLA-DOBP13765 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-DOBP13765 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DOBP13765 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DOBP13765 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-DOBP13765 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DOBP13765 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DOBP13765 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DOBP13765 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-DOBP13765 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DOBP13765 AC120498.8-201ENST00000614275 531 ntBASIC17.6■□□□□ 0.41
HLA-DOBP13765 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.6■□□□□ 0.41
HLA-DOBP13765 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HLA-DOBP13765 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DOBP13765 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-DOBP13765 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HLA-DOBP13765 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms