Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TMEM179-206ENST00000616017 1645 ntBASIC19.13■□□□□ 0.65
PCNAP12004 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PCNAP12004 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 AL158211.5-201ENST00000623583 2518 ntBASIC19.12■□□□□ 0.65
PCNAP12004 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.12■□□□□ 0.65
PCNAP12004 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.12■□□□□ 0.65
PCNAP12004 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.12■□□□□ 0.65
PCNAP12004 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCNAP12004 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.12■□□□□ 0.65
PCNAP12004 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.12■□□□□ 0.65
PCNAP12004 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.12■□□□□ 0.65
PCNAP12004 AC091874.3-201ENST00000512672 1195 ntBASIC19.12■□□□□ 0.65
PCNAP12004 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PCNAP12004 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCNAP12004 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCNAP12004 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.12■□□□□ 0.65
PCNAP12004 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCNAP12004 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.11■□□□□ 0.65
PCNAP12004 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.11■□□□□ 0.65
PCNAP12004 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.11■□□□□ 0.65
PCNAP12004 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.11■□□□□ 0.65
PCNAP12004 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.11■□□□□ 0.65
PCNAP12004 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
PCNAP12004 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.11■□□□□ 0.65
PCNAP12004 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.11■□□□□ 0.65
PCNAP12004 AL138781.1-201ENST00000566567 1274 ntBASIC19.11■□□□□ 0.65
PCNAP12004 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.11■□□□□ 0.65
PCNAP12004 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCNAP12004 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
PCNAP12004 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCNAP12004 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 AC125437.2-201ENST00000625180 2167 ntBASIC19.1■□□□□ 0.65
PCNAP12004 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCNAP12004 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.1■□□□□ 0.65
PCNAP12004 AC098818.2-201ENST00000564925 2320 ntBASIC19.1■□□□□ 0.65
PCNAP12004 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.1■□□□□ 0.65
PCNAP12004 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCNAP12004 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCNAP12004 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.1■□□□□ 0.65
PCNAP12004 AL390719.1-204ENST00000412397 1219 ntBASIC19.1■□□□□ 0.65
PCNAP12004 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.1■□□□□ 0.65
PCNAP12004 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.1■□□□□ 0.65
PCNAP12004 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCNAP12004 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PCNAP12004 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.09■□□□□ 0.65
PCNAP12004 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.09■□□□□ 0.65
PCNAP12004 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.09■□□□□ 0.65
PCNAP12004 AC097658.1-201ENST00000475555 843 ntBASIC19.09■□□□□ 0.65
PCNAP12004 AC098934.4-201ENST00000564127 592 ntBASIC19.09■□□□□ 0.65
PCNAP12004 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
PCNAP12004 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms