Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
GYPBP06028 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GYPBP06028 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GYPBP06028 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GYPBP06028 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.64■□□□□ 0.42
GYPBP06028 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
GYPBP06028 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
GYPBP06028 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
GYPBP06028 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.64■□□□□ 0.41
GYPBP06028 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 HLA-G-202ENST00000376815 851 ntBASIC17.64■□□□□ 0.41
GYPBP06028 HLA-G-203ENST00000376818 1127 ntBASIC17.64■□□□□ 0.41
GYPBP06028 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.64■□□□□ 0.41
GYPBP06028 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.64■□□□□ 0.41
GYPBP06028 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.64■□□□□ 0.41
GYPBP06028 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.64■□□□□ 0.41
GYPBP06028 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.64■□□□□ 0.41
GYPBP06028 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.64■□□□□ 0.41
GYPBP06028 BID-214ENST00000617586 542 ntTSL 5 BASIC17.64■□□□□ 0.41
GYPBP06028 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.64■□□□□ 0.41
GYPBP06028 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 PHGDH-210ENST00000641115 1638 ntBASIC17.64■□□□□ 0.41
GYPBP06028 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
GYPBP06028 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GYPBP06028 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.64■□□□□ 0.41
GYPBP06028 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
GYPBP06028 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GYPBP06028 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.64■□□□□ 0.41
GYPBP06028 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.63■□□□□ 0.41
GYPBP06028 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GYPBP06028 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 AC026271.2-201ENST00000428091 497 ntBASIC17.63■□□□□ 0.41
GYPBP06028 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GYPBP06028 AC010980.2-201ENST00000587099 1412 ntBASIC17.63■□□□□ 0.41
GYPBP06028 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
GYPBP06028 KRT17P1-201ENST00000399211 1546 ntBASIC17.62■□□□□ 0.41
GYPBP06028 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GYPBP06028 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 AC007322.1-201ENST00000426983 750 ntBASIC17.62■□□□□ 0.41
GYPBP06028 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.62■□□□□ 0.41
GYPBP06028 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.62■□□□□ 0.41
GYPBP06028 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.62■□□□□ 0.41
GYPBP06028 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.62■□□□□ 0.41
GYPBP06028 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
GYPBP06028 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.62■□□□□ 0.41
GYPBP06028 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GYPBP06028 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
GYPBP06028 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GYPBP06028 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GYPBP06028 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms