Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
COL5A2P05997 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.07■■□□□ 1.76
COL5A2P05997 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
COL5A2P05997 TMEM179-206ENST00000616017 1645 ntBASIC26.06■■□□□ 1.76
COL5A2P05997 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
COL5A2P05997 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL5A2P05997 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26.06■■□□□ 1.76
COL5A2P05997 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC26.06■■□□□ 1.76
COL5A2P05997 GLRB-205ENST00000512619 728 ntTSL 3 BASIC26.06■■□□□ 1.76
COL5A2P05997 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL5A2P05997 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
COL5A2P05997 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL5A2P05997 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
COL5A2P05997 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL5A2P05997 FP700111.2-201ENST00000619190 1892 ntBASIC26.06■■□□□ 1.76
COL5A2P05997 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL5A2P05997 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC26.06■■□□□ 1.76
COL5A2P05997 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.06■■□□□ 1.76
COL5A2P05997 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.06■■□□□ 1.76
COL5A2P05997 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL5A2P05997 FEM1AP4-201ENST00000443167 1987 ntBASIC26.05■■□□□ 1.76
COL5A2P05997 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL5A2P05997 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
COL5A2P05997 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
COL5A2P05997 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC26.05■■□□□ 1.76
COL5A2P05997 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL5A2P05997 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL5A2P05997 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.05■■□□□ 1.76
COL5A2P05997 CA15P1-201ENST00000481698 905 ntBASIC26.04■■□□□ 1.76
COL5A2P05997 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC26.04■■□□□ 1.76
COL5A2P05997 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL5A2P05997 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL5A2P05997 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL5A2P05997 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
COL5A2P05997 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL5A2P05997 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL5A2P05997 AC026396.1-201ENST00000419388 421 ntBASIC26.04■■□□□ 1.76
COL5A2P05997 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC26.04■■□□□ 1.76
COL5A2P05997 DAP-202ENST00000432074 1048 ntTSL 2 BASIC26.04■■□□□ 1.76
COL5A2P05997 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC26.04■■□□□ 1.76
COL5A2P05997 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL5A2P05997 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC26.04■■□□□ 1.76
COL5A2P05997 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC26.04■■□□□ 1.76
COL5A2P05997 ETFA-216ENST00000560726 942 ntTSL 3 BASIC26.04■■□□□ 1.76
COL5A2P05997 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
COL5A2P05997 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC26.04■■□□□ 1.76
COL5A2P05997 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC26.04■■□□□ 1.76
COL5A2P05997 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.03■■□□□ 1.76
COL5A2P05997 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.03■■□□□ 1.76
COL5A2P05997 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.03■■□□□ 1.76
COL5A2P05997 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL5A2P05997 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
COL5A2P05997 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC26.03■■□□□ 1.76
COL5A2P05997 PTK2-216ENST00000519881 863 ntTSL 3 BASIC26.03■■□□□ 1.76
COL5A2P05997 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC26.03■■□□□ 1.76
COL5A2P05997 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC26.03■■□□□ 1.76
COL5A2P05997 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL5A2P05997 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL5A2P05997 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC26.02■■□□□ 1.76
COL5A2P05997 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
COL5A2P05997 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
COL5A2P05997 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC26.02■■□□□ 1.76
COL5A2P05997 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.02■■□□□ 1.76
COL5A2P05997 AL512604.3-201ENST00000569583 964 ntBASIC26.02■■□□□ 1.76
COL5A2P05997 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.02■■□□□ 1.76
COL5A2P05997 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.02■■□□□ 1.76
COL5A2P05997 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL5A2P05997 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.01■■□□□ 1.75
COL5A2P05997 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL5A2P05997 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL5A2P05997 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
COL5A2P05997 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL5A2P05997 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC26.01■■□□□ 1.75
COL5A2P05997 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
COL5A2P05997 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC26.01■■□□□ 1.75
COL5A2P05997 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL5A2P05997 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL5A2P05997 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC26.01■■□□□ 1.75
COL5A2P05997 AL031432.5-201ENST00000641059 760 ntBASIC26.01■■□□□ 1.75
COL5A2P05997 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.01■■□□□ 1.75
COL5A2P05997 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL5A2P05997 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
COL5A2P05997 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL5A2P05997 AP003041.3-201ENST00000527151 707 ntBASIC26■■□□□ 1.75
COL5A2P05997 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC26■■□□□ 1.75
COL5A2P05997 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC26■■□□□ 1.75
COL5A2P05997 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
COL5A2P05997 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
COL5A2P05997 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL5A2P05997 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
COL5A2P05997 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL5A2P05997 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
COL5A2P05997 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms