Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 HCG11-201ENST00000411553 5696 ntBASIC16.31■□□□□ 0.2
SFT2D2O95562 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 AC105265.2-201ENST00000467189 838 ntBASIC16.31■□□□□ 0.2
SFT2D2O95562 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D2O95562 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.31■□□□□ 0.2
SFT2D2O95562 AL356652.1-201ENST00000615962 565 ntBASIC16.31■□□□□ 0.2
SFT2D2O95562 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.31■□□□□ 0.2
SFT2D2O95562 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SFT2D2O95562 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 AL161938.1-201ENST00000569833 2180 ntBASIC16.31■□□□□ 0.2
SFT2D2O95562 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.31■□□□□ 0.2
SFT2D2O95562 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SFT2D2O95562 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFT2D2O95562 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D2O95562 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D2O95562 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D2O95562 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.3■□□□□ 0.2
SFT2D2O95562 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SFT2D2O95562 AC135279.3-201ENST00000610945 1311 ntBASIC16.3■□□□□ 0.2
SFT2D2O95562 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D2O95562 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D2O95562 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.3■□□□□ 0.2
SFT2D2O95562 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D2O95562 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.3■□□□□ 0.2
SFT2D2O95562 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SFT2D2O95562 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D2O95562 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
SFT2D2O95562 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SFT2D2O95562 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D2O95562 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.3■□□□□ 0.2
SFT2D2O95562 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFT2D2O95562 AC090340.1-201ENST00000620778 4980 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 KRT8P17-201ENST00000453110 1448 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SFT2D2O95562 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 AL136116.3-201ENST00000402907 1138 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.29■□□□□ 0.2
SFT2D2O95562 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4L2-201ENST00000561772 1275 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
SFT2D2O95562 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4L6-201ENST00000626483 1275 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4L1-201ENST00000627662 1275 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4L8-201ENST00000629013 1275 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4L3-201ENST00000630187 1275 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4L7-201ENST00000630678 1275 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 DUX4L5-201ENST00000630834 1275 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.29■□□□□ 0.2
SFT2D2O95562 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 AC006333.2-201ENST00000607957 2099 ntBASIC16.29■□□□□ 0.2
SFT2D2O95562 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.29■□□□□ 0.2
SFT2D2O95562 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.29■□□□□ 0.2
SFT2D2O95562 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SFT2D2O95562 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SFT2D2O95562 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SFT2D2O95562 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.29■□□□□ 0.2
SFT2D2O95562 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 RBM17P2-201ENST00000616397 1405 ntBASIC16.28■□□□□ 0.2
SFT2D2O95562 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.28■□□□□ 0.2
SFT2D2O95562 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SFT2D2O95562 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.28■□□□□ 0.2
SFT2D2O95562 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms