Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BEST1O76090 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.72■□□□□ 0.91
BEST1O76090 AC233702.5-201ENST00000584107 538 ntBASIC20.72■□□□□ 0.91
BEST1O76090 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BEST1O76090 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
BEST1O76090 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.72■□□□□ 0.91
BEST1O76090 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.72■□□□□ 0.91
BEST1O76090 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BEST1O76090 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.71■□□□□ 0.91
BEST1O76090 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BEST1O76090 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 KRT18P16-201ENST00000510337 1294 ntBASIC20.71■□□□□ 0.91
BEST1O76090 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.71■□□□□ 0.91
BEST1O76090 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.71■□□□□ 0.91
BEST1O76090 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
BEST1O76090 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BEST1O76090 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BEST1O76090 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.71■□□□□ 0.91
BEST1O76090 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
BEST1O76090 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.7■□□□□ 0.9
BEST1O76090 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST1O76090 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.7■□□□□ 0.9
BEST1O76090 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST1O76090 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.7■□□□□ 0.9
BEST1O76090 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.7■□□□□ 0.9
BEST1O76090 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BEST1O76090 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST1O76090 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.7■□□□□ 0.9
BEST1O76090 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BEST1O76090 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
BEST1O76090 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BEST1O76090 AC012618.2-201ENST00000428058 849 ntBASIC20.69■□□□□ 0.9
BEST1O76090 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.69■□□□□ 0.9
BEST1O76090 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.69■□□□□ 0.9
BEST1O76090 AF186192.3-201ENST00000583427 947 ntBASIC20.69■□□□□ 0.9
BEST1O76090 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.69■□□□□ 0.9
BEST1O76090 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.69■□□□□ 0.9
BEST1O76090 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
BEST1O76090 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST1O76090 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.68■□□□□ 0.9
BEST1O76090 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BEST1O76090 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.68■□□□□ 0.9
BEST1O76090 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.68■□□□□ 0.9
BEST1O76090 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
BEST1O76090 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.68■□□□□ 0.9
BEST1O76090 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.68■□□□□ 0.9
BEST1O76090 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.68■□□□□ 0.9
BEST1O76090 AC113410.3-201ENST00000623366 203 ntBASIC20.68■□□□□ 0.9
BEST1O76090 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.68■□□□□ 0.9
BEST1O76090 AL049637.2-201ENST00000641778 930 ntBASIC20.68■□□□□ 0.9
BEST1O76090 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.68■□□□□ 0.9
BEST1O76090 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.68■□□□□ 0.9
BEST1O76090 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST1O76090 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.67■□□□□ 0.9
BEST1O76090 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST1O76090 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms