Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT3O75175 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
CNOT3O75175 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.03■□□□□ 0.64
CNOT3O75175 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.03■□□□□ 0.64
CNOT3O75175 PLK5-205ENST00000642079 1969 ntBASIC19.02■□□□□ 0.64
CNOT3O75175 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.02■□□□□ 0.64
CNOT3O75175 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.02■□□□□ 0.64
CNOT3O75175 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.02■□□□□ 0.64
CNOT3O75175 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.02■□□□□ 0.64
CNOT3O75175 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CNOT3O75175 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT3O75175 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT3O75175 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT3O75175 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CNOT3O75175 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT3O75175 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT3O75175 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CNOT3O75175 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 AC006128.1-201ENST00000624704 1661 ntBASIC19.01■□□□□ 0.63
CNOT3O75175 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CNOT3O75175 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.01■□□□□ 0.63
CNOT3O75175 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.01■□□□□ 0.63
CNOT3O75175 AC120498.8-201ENST00000614275 531 ntBASIC19.01■□□□□ 0.63
CNOT3O75175 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CNOT3O75175 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CNOT3O75175 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.01■□□□□ 0.63
CNOT3O75175 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT3O75175 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CNOT3O75175 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19■□□□□ 0.63
CNOT3O75175 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CNOT3O75175 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNOT3O75175 AC073314.1-201ENST00000568729 2216 ntBASIC19■□□□□ 0.63
CNOT3O75175 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19■□□□□ 0.63
CNOT3O75175 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19■□□□□ 0.63
CNOT3O75175 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19■□□□□ 0.63
CNOT3O75175 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19■□□□□ 0.63
CNOT3O75175 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19■□□□□ 0.63
CNOT3O75175 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19■□□□□ 0.63
CNOT3O75175 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19■□□□□ 0.63
CNOT3O75175 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19■□□□□ 0.63
CNOT3O75175 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNOT3O75175 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT3O75175 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19■□□□□ 0.63
CNOT3O75175 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.99■□□□□ 0.63
CNOT3O75175 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CNOT3O75175 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.99■□□□□ 0.63
CNOT3O75175 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT3O75175 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.99■□□□□ 0.63
CNOT3O75175 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT3O75175 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.99■□□□□ 0.63
CNOT3O75175 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms