Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
BRD4O60885 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
BRD4O60885 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC27.28■■□□□ 1.96
BRD4O60885 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC27.28■■□□□ 1.96
BRD4O60885 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC27.28■■□□□ 1.96
BRD4O60885 FITM1-202ENST00000559294 800 ntBASIC27.28■■□□□ 1.96
BRD4O60885 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC27.28■■□□□ 1.96
BRD4O60885 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
BRD4O60885 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC27.28■■□□□ 1.96
BRD4O60885 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
BRD4O60885 H19-201ENST00000411754 1788 ntTSL 5 BASIC27.28■■□□□ 1.96
BRD4O60885 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BRD4O60885 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC27.27■■□□□ 1.96
BRD4O60885 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC27.27■■□□□ 1.96
BRD4O60885 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC27.27■■□□□ 1.96
BRD4O60885 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
BRD4O60885 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC27.27■■□□□ 1.96
BRD4O60885 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BRD4O60885 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC27.27■■□□□ 1.96
BRD4O60885 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
BRD4O60885 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BRD4O60885 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC27.27■■□□□ 1.96
BRD4O60885 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
BRD4O60885 KRT16P1-201ENST00000399124 1418 ntBASIC27.26■■□□□ 1.95
BRD4O60885 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC27.26■■□□□ 1.95
BRD4O60885 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
BRD4O60885 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
BRD4O60885 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC27.26■■□□□ 1.95
BRD4O60885 AC026271.3-201ENST00000571884 352 ntBASIC27.26■■□□□ 1.95
BRD4O60885 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC27.26■■□□□ 1.95
BRD4O60885 AP000525.1-201ENST00000608286 694 ntBASIC27.26■■□□□ 1.95
BRD4O60885 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 TCF3P1-201ENST00000423021 1937 ntBASIC27.26■■□□□ 1.95
BRD4O60885 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
BRD4O60885 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
BRD4O60885 KRT8P9-201ENST00000558927 1449 ntBASIC27.25■■□□□ 1.95
BRD4O60885 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
BRD4O60885 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
BRD4O60885 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
BRD4O60885 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC27.25■■□□□ 1.95
BRD4O60885 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC27.25■■□□□ 1.95
BRD4O60885 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
BRD4O60885 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
BRD4O60885 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
BRD4O60885 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
BRD4O60885 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC27.25■■□□□ 1.95
BRD4O60885 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC27.25■■□□□ 1.95
BRD4O60885 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC27.25■■□□□ 1.95
BRD4O60885 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
BRD4O60885 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC27.25■■□□□ 1.95
BRD4O60885 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC27.25■■□□□ 1.95
BRD4O60885 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC27.25■■□□□ 1.95
BRD4O60885 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC27.25■■□□□ 1.95
BRD4O60885 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC27.25■■□□□ 1.95
BRD4O60885 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
BRD4O60885 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC27.24■■□□□ 1.95
BRD4O60885 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
BRD4O60885 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 C1QL1P1-201ENST00000568105 661 ntBASIC27.24■■□□□ 1.95
BRD4O60885 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC27.24■■□□□ 1.95
BRD4O60885 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
BRD4O60885 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC27.24■■□□□ 1.95
BRD4O60885 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.24■■□□□ 1.95
BRD4O60885 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC27.24■■□□□ 1.95
BRD4O60885 SLC25A24-204ENST00000569674 2357 ntBASIC27.23■■□□□ 1.95
BRD4O60885 CALM3-202ENST00000391918 702 ntTSL 2 BASIC27.23■■□□□ 1.95
BRD4O60885 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC27.23■■□□□ 1.95
BRD4O60885 AC113347.1-201ENST00000413321 391 ntBASIC27.23■■□□□ 1.95
BRD4O60885 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
BRD4O60885 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
BRD4O60885 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
BRD4O60885 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC27.23■■□□□ 1.95
BRD4O60885 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
BRD4O60885 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
BRD4O60885 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms