Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF2O60811 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 AC133681.1-201ENST00000465482 601 ntBASIC18.48■□□□□ 0.55
PRAMEF2O60811 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 AC124016.1-201ENST00000609552 612 ntBASIC18.48■□□□□ 0.55
PRAMEF2O60811 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF2O60811 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF2O60811 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PRAMEF2O60811 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.47■□□□□ 0.55
PRAMEF2O60811 AP001271.2-201ENST00000624018 1556 ntBASIC18.47■□□□□ 0.55
PRAMEF2O60811 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PRAMEF2O60811 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.46■□□□□ 0.55
PRAMEF2O60811 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PRAMEF2O60811 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF2O60811 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF2O60811 KRASP1-201ENST00000407852 552 ntBASIC18.45■□□□□ 0.54
PRAMEF2O60811 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 SNORA78-201ENST00000459373 127 ntBASIC18.45■□□□□ 0.54
PRAMEF2O60811 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF2O60811 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.45■□□□□ 0.54
PRAMEF2O60811 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRAMEF2O60811 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms