Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.04■□□□□ 0.16
SSSCA1O60232 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSSCA1O60232 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.04■□□□□ 0.16
SSSCA1O60232 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SSSCA1O60232 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.04■□□□□ 0.16
SSSCA1O60232 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.03■□□□□ 0.16
SSSCA1O60232 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.03■□□□□ 0.16
SSSCA1O60232 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.03■□□□□ 0.16
SSSCA1O60232 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.03■□□□□ 0.16
SSSCA1O60232 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SSSCA1O60232 AC091799.1-201ENST00000422823 811 ntBASIC16.03■□□□□ 0.16
SSSCA1O60232 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SSSCA1O60232 AC105265.2-201ENST00000467189 838 ntBASIC16.03■□□□□ 0.16
SSSCA1O60232 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.03■□□□□ 0.16
SSSCA1O60232 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.03■□□□□ 0.16
SSSCA1O60232 AL354811.1-201ENST00000610286 706 ntBASIC16.03■□□□□ 0.16
SSSCA1O60232 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.03■□□□□ 0.16
SSSCA1O60232 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.03■□□□□ 0.16
SSSCA1O60232 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.03■□□□□ 0.16
SSSCA1O60232 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SSSCA1O60232 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SSSCA1O60232 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SSSCA1O60232 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SSSCA1O60232 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
SSSCA1O60232 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.02■□□□□ 0.16
SSSCA1O60232 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSSCA1O60232 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.02■□□□□ 0.16
SSSCA1O60232 AP001330.3-201ENST00000520123 633 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.02■□□□□ 0.16
SSSCA1O60232 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.02■□□□□ 0.16
SSSCA1O60232 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4L2-201ENST00000561772 1275 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
SSSCA1O60232 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4L6-201ENST00000626483 1275 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4L1-201ENST00000627662 1275 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4L8-201ENST00000629013 1275 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4L3-201ENST00000630187 1275 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4L7-201ENST00000630678 1275 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 DUX4L5-201ENST00000630834 1275 ntBASIC16.02■□□□□ 0.16
SSSCA1O60232 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SSSCA1O60232 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.02■□□□□ 0.15
SSSCA1O60232 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSSCA1O60232 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSSCA1O60232 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SSSCA1O60232 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SSSCA1O60232 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SSSCA1O60232 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SSSCA1O60232 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.01■□□□□ 0.15
SSSCA1O60232 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.01■□□□□ 0.15
SSSCA1O60232 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SSSCA1O60232 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSSCA1O60232 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.01■□□□□ 0.15
SSSCA1O60232 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSSCA1O60232 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSSCA1O60232 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SSSCA1O60232 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16■□□□□ 0.15
SSSCA1O60232 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SSSCA1O60232 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSSCA1O60232 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSSCA1O60232 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SSSCA1O60232 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16■□□□□ 0.15
SSSCA1O60232 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SSSCA1O60232 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSSCA1O60232 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms