Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
KDELR3O43731 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
KDELR3O43731 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.01■□□□□ 0.79
KDELR3O43731 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
KDELR3O43731 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20■□□□□ 0.79
KDELR3O43731 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20■□□□□ 0.79
KDELR3O43731 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20■□□□□ 0.79
KDELR3O43731 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20■□□□□ 0.79
KDELR3O43731 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20■□□□□ 0.79
KDELR3O43731 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
KDELR3O43731 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20■□□□□ 0.79
KDELR3O43731 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KDELR3O43731 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20■□□□□ 0.79
KDELR3O43731 AC073130.3-201ENST00000624389 2278 ntBASIC20■□□□□ 0.79
KDELR3O43731 MME-217ENST00000616757 1315 ntTSL 5 BASIC20■□□□□ 0.79
KDELR3O43731 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
KDELR3O43731 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
KDELR3O43731 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KDELR3O43731 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
KDELR3O43731 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KDELR3O43731 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.99■□□□□ 0.79
KDELR3O43731 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.99■□□□□ 0.79
KDELR3O43731 AP006294.2-201ENST00000641667 209 ntBASIC19.99■□□□□ 0.79
KDELR3O43731 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
KDELR3O43731 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.99■□□□□ 0.79
KDELR3O43731 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
KDELR3O43731 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KDELR3O43731 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
KDELR3O43731 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
KDELR3O43731 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.98■□□□□ 0.79
KDELR3O43731 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 RARRES2P10-201ENST00000564312 460 ntBASIC19.98■□□□□ 0.79
KDELR3O43731 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.98■□□□□ 0.79
KDELR3O43731 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KDELR3O43731 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.98■□□□□ 0.79
KDELR3O43731 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.97■□□□□ 0.79
KDELR3O43731 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KDELR3O43731 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.97■□□□□ 0.79
KDELR3O43731 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.97■□□□□ 0.79
KDELR3O43731 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.97■□□□□ 0.79
KDELR3O43731 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
KDELR3O43731 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.97■□□□□ 0.79
KDELR3O43731 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KDELR3O43731 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.97■□□□□ 0.79
KDELR3O43731 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms