Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
LAMA5O15230 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 AL031432.5-201ENST00000641059 760 ntBASIC18.34■□□□□ 0.53
LAMA5O15230 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.34■□□□□ 0.53
LAMA5O15230 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.34■□□□□ 0.53
LAMA5O15230 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.34■□□□□ 0.53
LAMA5O15230 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.34■□□□□ 0.53
LAMA5O15230 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.34■□□□□ 0.53
LAMA5O15230 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.34■□□□□ 0.53
LAMA5O15230 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LAMA5O15230 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.33■□□□□ 0.53
LAMA5O15230 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMA5O15230 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LAMA5O15230 AL031008.1-201ENST00000619963 541 ntBASIC18.33■□□□□ 0.53
LAMA5O15230 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMA5O15230 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMA5O15230 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LAMA5O15230 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.33■□□□□ 0.53
LAMA5O15230 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
LAMA5O15230 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA5O15230 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMA5O15230 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LAMA5O15230 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA5O15230 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.33■□□□□ 0.52
LAMA5O15230 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.33■□□□□ 0.52
LAMA5O15230 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.33■□□□□ 0.52
LAMA5O15230 AC106795.1-205ENST00000512851 1056 ntBASIC18.33■□□□□ 0.52
LAMA5O15230 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA5O15230 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LAMA5O15230 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
LAMA5O15230 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA5O15230 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LAMA5O15230 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMA5O15230 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.33■□□□□ 0.52
LAMA5O15230 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMA5O15230 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMA5O15230 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.33■□□□□ 0.52
LAMA5O15230 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA5O15230 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA5O15230 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LAMA5O15230 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.32■□□□□ 0.52
LAMA5O15230 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.32■□□□□ 0.52
LAMA5O15230 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA5O15230 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA5O15230 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
LAMA5O15230 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.32■□□□□ 0.52
LAMA5O15230 AL136038.3-201ENST00000561909 1096 ntBASIC18.32■□□□□ 0.52
LAMA5O15230 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA5O15230 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA5O15230 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LAMA5O15230 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMA5O15230 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 RNA5SP419-201ENST00000515908 135 ntBASIC18.31■□□□□ 0.52
LAMA5O15230 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMA5O15230 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.31■□□□□ 0.52
LAMA5O15230 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMA5O15230 LINC02084-201ENST00000606069 1096 ntBASIC18.31■□□□□ 0.52
LAMA5O15230 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA5O15230 MIR3652-201ENST00000579335 131 ntBASIC18.31■□□□□ 0.52
LAMA5O15230 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMA5O15230 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 AP006587.1-201ENST00000534129 1502 ntBASIC18.31■□□□□ 0.52
LAMA5O15230 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMA5O15230 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.3■□□□□ 0.52
LAMA5O15230 C1QL1P1-201ENST00000568105 661 ntBASIC18.3■□□□□ 0.52
LAMA5O15230 AC141257.4-201ENST00000634557 245 ntBASIC18.3■□□□□ 0.52
LAMA5O15230 AC136944.6-201ENST00000634818 245 ntBASIC18.3■□□□□ 0.52
LAMA5O15230 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA5O15230 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LAMA5O15230 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA5O15230 SPDYE15P-201ENST00000424157 909 ntBASIC18.3■□□□□ 0.52
LAMA5O15230 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.3■□□□□ 0.52
LAMA5O15230 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA5O15230 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA5O15230 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LAMA5O15230 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA5O15230 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA5O15230 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA5O15230 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA5O15230 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMA5O15230 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA5O15230 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMA5O15230 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
LAMA5O15230 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms