Protein–RNA interactions for Protein: O14745

SLC9A3R1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, humanhuman

Predicted RBP Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1O14745 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 AC004980.1-204ENST00000429707 299 ntBASIC20.2■□□□□ 0.82
SLC9A3R1O14745 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC9A3R1O14745 LINC01568-207ENST00000641790 1380 ntBASIC20.2■□□□□ 0.82
SLC9A3R1O14745 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 RCN1P1-201ENST00000400413 996 ntBASIC20.19■□□□□ 0.82
SLC9A3R1O14745 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 AC005363.2-201ENST00000618631 242 ntBASIC20.19■□□□□ 0.82
SLC9A3R1O14745 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.19■□□□□ 0.82
SLC9A3R1O14745 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.19■□□□□ 0.82
SLC9A3R1O14745 TMEM179-206ENST00000616017 1645 ntBASIC20.19■□□□□ 0.82
SLC9A3R1O14745 AC020907.5-201ENST00000624372 1936 ntBASIC20.19■□□□□ 0.82
SLC9A3R1O14745 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC9A3R1O14745 KRT8P9-201ENST00000558927 1449 ntBASIC20.19■□□□□ 0.82
SLC9A3R1O14745 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 AL390955.1-201ENST00000428694 934 ntBASIC20.18■□□□□ 0.82
SLC9A3R1O14745 B3GAT3P1-201ENST00000471720 806 ntBASIC20.18■□□□□ 0.82
SLC9A3R1O14745 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 AC010331.1-201ENST00000611423 582 ntBASIC20.18■□□□□ 0.82
SLC9A3R1O14745 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 KRT18P22-201ENST00000402024 1347 ntBASIC20.18■□□□□ 0.82
SLC9A3R1O14745 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.18■□□□□ 0.82
SLC9A3R1O14745 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 MESTP1-201ENST00000404287 994 ntBASIC20.17■□□□□ 0.82
SLC9A3R1O14745 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 AP005242.2-201ENST00000580065 1175 ntBASIC20.17■□□□□ 0.82
SLC9A3R1O14745 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC9A3R1O14745 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 C2orf69P3-201ENST00000565542 1120 ntBASIC20.16■□□□□ 0.82
SLC9A3R1O14745 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 KRT8P8-201ENST00000434750 1448 ntBASIC20.16■□□□□ 0.82
SLC9A3R1O14745 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC9A3R1O14745 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms