Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 KRT19P1-201ENST00000405746 1186 ntBASIC18.69■□□□□ 0.58
PDLIM1O00151 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDLIM1O00151 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.69■□□□□ 0.58
PDLIM1O00151 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.69■□□□□ 0.58
PDLIM1O00151 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.69■□□□□ 0.58
PDLIM1O00151 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.69■□□□□ 0.58
PDLIM1O00151 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDLIM1O00151 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM1O00151 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.69■□□□□ 0.58
PDLIM1O00151 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDLIM1O00151 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PDLIM1O00151 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 FZD10-202ENST00000539839 3282 ntBASIC18.68■□□□□ 0.58
PDLIM1O00151 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
PDLIM1O00151 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM1O00151 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM1O00151 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM1O00151 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM1O00151 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.68■□□□□ 0.58
PDLIM1O00151 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM1O00151 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM1O00151 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM1O00151 AC104187.1-201ENST00000607510 612 ntBASIC18.68■□□□□ 0.58
PDLIM1O00151 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM1O00151 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM1O00151 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PDLIM1O00151 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM1O00151 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PDLIM1O00151 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PDLIM1O00151 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.67■□□□□ 0.58
PDLIM1O00151 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDLIM1O00151 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 AC092666.2-201ENST00000613287 246 ntBASIC18.67■□□□□ 0.58
PDLIM1O00151 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM1O00151 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM1O00151 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM1O00151 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM1O00151 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM1O00151 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM1O00151 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM1O00151 AL138781.2-201ENST00000617896 1843 ntBASIC18.67■□□□□ 0.58
PDLIM1O00151 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM1O00151 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM1O00151 PRORSD1P-202ENST00000563365 2154 ntBASIC18.66■□□□□ 0.58
PDLIM1O00151 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM1O00151 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM1O00151 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM1O00151 AC138907.5-202ENST00000569484 235 ntBASIC18.66■□□□□ 0.58
PDLIM1O00151 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.66■□□□□ 0.58
PDLIM1O00151 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 AC092437.1-201ENST00000624794 1048 ntBASIC18.66■□□□□ 0.58
PDLIM1O00151 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PDLIM1O00151 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM1O00151 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PDLIM1O00151 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDLIM1O00151 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM1O00151 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms