Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NACAE9PAV3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NACAE9PAV3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NACAE9PAV3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.34□□□□□ -0.11
NACAE9PAV3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.34□□□□□ -0.11
NACAE9PAV3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NACAE9PAV3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
NACAE9PAV3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.34□□□□□ -0.11
NACAE9PAV3 AL512625.2-201ENST00000417533 625 ntBASIC14.34□□□□□ -0.11
NACAE9PAV3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.34□□□□□ -0.11
NACAE9PAV3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.34□□□□□ -0.11
NACAE9PAV3 AC066615.1-201ENST00000640911 628 ntBASIC14.34□□□□□ -0.11
NACAE9PAV3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NACAE9PAV3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.34□□□□□ -0.11
NACAE9PAV3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NACAE9PAV3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.34□□□□□ -0.11
NACAE9PAV3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.34□□□□□ -0.11
NACAE9PAV3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.34□□□□□ -0.11
NACAE9PAV3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.34□□□□□ -0.11
NACAE9PAV3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.34□□□□□ -0.11
NACAE9PAV3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
NACAE9PAV3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.34□□□□□ -0.11
NACAE9PAV3 MYC-209ENST00000641252 345 ntBASIC14.34□□□□□ -0.11
NACAE9PAV3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NACAE9PAV3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NACAE9PAV3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NACAE9PAV3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NACAE9PAV3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
NACAE9PAV3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NACAE9PAV3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NACAE9PAV3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.33□□□□□ -0.12
NACAE9PAV3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.33□□□□□ -0.12
NACAE9PAV3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.33□□□□□ -0.12
NACAE9PAV3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NACAE9PAV3 AL591742.1-201ENST00000604433 565 ntBASIC14.33□□□□□ -0.12
NACAE9PAV3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.33□□□□□ -0.12
NACAE9PAV3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.33□□□□□ -0.12
NACAE9PAV3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NACAE9PAV3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.33□□□□□ -0.12
NACAE9PAV3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
NACAE9PAV3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
NACAE9PAV3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NACAE9PAV3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 MCRIP2P1-201ENST00000394346 511 ntBASIC14.32□□□□□ -0.12
NACAE9PAV3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.32□□□□□ -0.12
NACAE9PAV3 AC133041.1-202ENST00000642053 222 ntBASIC14.32□□□□□ -0.12
NACAE9PAV3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.32□□□□□ -0.12
NACAE9PAV3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.32□□□□□ -0.12
NACAE9PAV3 AC010980.2-201ENST00000587099 1412 ntBASIC14.32□□□□□ -0.12
NACAE9PAV3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.32□□□□□ -0.12
NACAE9PAV3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.32□□□□□ -0.12
NACAE9PAV3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.32□□□□□ -0.12
NACAE9PAV3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.32□□□□□ -0.12
NACAE9PAV3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.32□□□□□ -0.12
NACAE9PAV3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NACAE9PAV3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NACAE9PAV3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
NACAE9PAV3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NACAE9PAV3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms