Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 AP006587.1-201ENST00000534129 1502 ntBASIC17.44■□□□□ 0.38
NPIPB4C9JG80 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 SOX15-203ENST00000570788 1093 ntBASIC17.44■□□□□ 0.38
NPIPB4C9JG80 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 AC008687.6-201ENST00000596318 630 ntBASIC17.44■□□□□ 0.38
NPIPB4C9JG80 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 AC124283.5-201ENST00000624661 1809 ntBASIC17.44■□□□□ 0.38
NPIPB4C9JG80 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPIPB4C9JG80 BX323043.1-201ENST00000641006 1765 ntBASIC17.43■□□□□ 0.38
NPIPB4C9JG80 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.43■□□□□ 0.38
NPIPB4C9JG80 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPIPB4C9JG80 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 UNC93B4-201ENST00000505679 747 ntBASIC17.42■□□□□ 0.38
NPIPB4C9JG80 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPIPB4C9JG80 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 HLA-L-209ENST00000420110 1011 ntBASIC17.41■□□□□ 0.38
NPIPB4C9JG80 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.41■□□□□ 0.38
NPIPB4C9JG80 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms