Protein–RNA interactions for Protein: B8ZZ34

SHISA8, Putative protein shisa-8, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA8B8ZZ34 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 PRKY-204ENST00000533551 1019 ntBASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 AL359736.2-201ENST00000621992 437 ntBASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SHISA8B8ZZ34 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 GCSHP5-201ENST00000443090 522 ntBASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 AC124016.1-201ENST00000609552 612 ntBASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
SHISA8B8ZZ34 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA8B8ZZ34 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.83■□□□□ 0.45
SHISA8B8ZZ34 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA8B8ZZ34 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA8B8ZZ34 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA8B8ZZ34 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA8B8ZZ34 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SHISA8B8ZZ34 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 FAM197Y4-202ENST00000622692 608 ntBASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 AP001271.2-201ENST00000624018 1556 ntBASIC17.83■□□□□ 0.44
SHISA8B8ZZ34 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 AC125437.2-201ENST00000625180 2167 ntBASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.82■□□□□ 0.44
SHISA8B8ZZ34 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms