Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP27XA6NNY8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.23■□□□□ 0.99
USP27XA6NNY8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 AP001330.3-201ENST00000520123 633 ntBASIC21.22■□□□□ 0.99
USP27XA6NNY8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 AP001271.2-201ENST00000624018 1556 ntBASIC21.22■□□□□ 0.99
USP27XA6NNY8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.22■□□□□ 0.99
USP27XA6NNY8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP27XA6NNY8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.21■□□□□ 0.99
USP27XA6NNY8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 AC079598.2-202ENST00000546624 1451 ntBASIC21.21■□□□□ 0.99
USP27XA6NNY8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP27XA6NNY8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.21■□□□□ 0.99
USP27XA6NNY8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.21■□□□□ 0.99
USP27XA6NNY8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.21■□□□□ 0.99
USP27XA6NNY8 AC243732.1-201ENST00000612648 864 ntBASIC21.21■□□□□ 0.99
USP27XA6NNY8 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.21■□□□□ 0.99
USP27XA6NNY8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.21■□□□□ 0.99
USP27XA6NNY8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP27XA6NNY8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 TEX21P-204ENST00000641479 1693 ntBASIC21.21■□□□□ 0.99
USP27XA6NNY8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP27XA6NNY8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 AL354751.1-201ENST00000412768 1863 ntBASIC21.2■□□□□ 0.98
USP27XA6NNY8 NOC2LP1-202ENST00000452600 2235 ntBASIC21.2■□□□□ 0.98
USP27XA6NNY8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 BICD1-207ENST00000551848 1962 ntBASIC21.2■□□□□ 0.98
USP27XA6NNY8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 AC104187.1-201ENST00000607510 612 ntBASIC21.2■□□□□ 0.98
USP27XA6NNY8 AL358852.1-201ENST00000623174 1268 ntBASIC21.2■□□□□ 0.98
USP27XA6NNY8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP27XA6NNY8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 KRT8P17-201ENST00000453110 1448 ntBASIC21.2■□□□□ 0.98
USP27XA6NNY8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
USP27XA6NNY8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP27XA6NNY8 FP475955.4-201ENST00000623131 1990 ntBASIC21.19■□□□□ 0.98
USP27XA6NNY8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.19■□□□□ 0.98
USP27XA6NNY8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP27XA6NNY8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
USP27XA6NNY8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
USP27XA6NNY8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP27XA6NNY8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP27XA6NNY8 AL031598.1-201ENST00000561511 1773 ntBASIC21.19■□□□□ 0.98
USP27XA6NNY8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP27XA6NNY8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.19■□□□□ 0.98
USP27XA6NNY8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.19■□□□□ 0.98
USP27XA6NNY8 AC105265.2-201ENST00000467189 838 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms