Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 OR10C1-204ENST00000622521 1039 ntBASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 AC231657.2-201ENST00000624556 255 ntBASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 KRT17P1-201ENST00000399211 1546 ntBASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TCRBV9S1A1TA0A576 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 BID-214ENST00000617586 542 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV9S1A1TA0A576 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV9S1A1TA0A576 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 AC007322.1-201ENST00000426983 750 ntBASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 AC093787.1-201ENST00000450396 207 ntBASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV9S1A1TA0A576 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TCRBV9S1A1TA0A576 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms