Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 AL445675.2-201ENST00000620291 557 ntBASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM28A0A1B0GU29 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM28A0A1B0GU29 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM28A0A1B0GU29 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SMIM28A0A1B0GU29 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 REXO1L10P-201ENST00000615707 1290 ntBASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 AC009237.14-201ENST00000609975 1594 ntBASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.14■□□□□ 0.97
SMIM28A0A1B0GU29 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM28A0A1B0GU29 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 AC211429.1-201ENST00000415277 523 ntBASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 AC116562.2-201ENST00000507042 360 ntBASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.12■□□□□ 0.97
SMIM28A0A1B0GU29 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 AL031985.4-201ENST00000642138 673 ntBASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.97
SMIM28A0A1B0GU29 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms