Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RPL10P17-201ENST00000453852 316 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 RFKP2-201ENST00000464555 477 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 ILF2P1-201ENST00000486302 1168 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC093267.1-201ENST00000489176 961 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC079382.1-201ENST00000493346 557 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 RN7SL78P-201ENST00000495193 281 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC114967.1-201ENST00000504890 259 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC097518.1-201ENST00000512516 421 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 Vault.3-201ENST00000516676 95 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AP001994.1-201ENST00000527539 826 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 RN7SL44P-201ENST00000583849 302 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 STX8P1-201ENST00000603161 355 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AL122127.1-201ENST00000603832 327 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AL049634.3-201ENST00000604968 457 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC113361.1-201ENST00000606683 543 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC068547.1-203ENST00000637559 1373 ntAPPRIS P5 TSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 CASC19-280ENST00000642102 1351 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 AC131971.1-201ENST00000332881 1482 ntBASIC9.84□□□□□ -0.83
RTN4Q9NQC3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC9.84□□□□□ -0.83
RTN4Q9NQC3 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AL353795.1-201ENST00000439134 1775 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 NAP1L4P1-201ENST00000319092 1157 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 Y_RNA.46-201ENST00000362695 102 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AL139095.2-201ENST00000407940 730 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC069218.2-201ENST00000411665 344 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AL157401.1-201ENST00000419836 344 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC098614.3-201ENST00000438957 440 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 UBQLN4P2-201ENST00000446233 948 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 RPL23AP20-201ENST00000447965 421 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 MTND1P12-201ENST00000455231 147 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 RPS20P32-201ENST00000456044 356 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 PRSS1-204ENST00000486171 803 ntTSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC022973.1-201ENST00000490340 575 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 TPM3P9-202ENST00000492121 745 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC022296.1-201ENST00000512176 682 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 TRAPPC4-206ENST00000525303 654 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC005186.1-201ENST00000534849 570 ntTSL 4 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AL359212.1-201ENST00000556608 614 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC124248.1-201ENST00000558221 402 ntTSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 LINC01852-202ENST00000559232 533 ntTSL 4 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 NR2F2-AS1-207ENST00000560170 547 ntTSL 4 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC010542.2-201ENST00000568560 511 ntTSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC012572.1-201ENST00000581634 397 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC005828.4-201ENST00000584608 552 ntTSL 4 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC005191.1-201ENST00000603950 358 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AL352984.2-201ENST00000611153 546 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC009237.17-201ENST00000618111 748 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 FAM166B-207ENST00000639789 651 ntTSL 2 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 HSPA8P14-201ENST00000552265 1805 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 ACTR3BP2-201ENST00000413404 1373 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 THUMPD3P1-201ENST00000506556 1480 ntBASIC9.83□□□□□ -0.84
RTN4Q9NQC3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
RTN4Q9NQC3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AL513523.1-201ENST00000417868 1309 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 CTBP2P2-201ENST00000434549 1334 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 PANDAR-201ENST00000629595 1506 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms