Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 U3.10-201ENST00000364459 214 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 CXADRP1-201ENST00000398098 1095 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 BX323845.3-201ENST00000428215 527 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 HSPE1P27-201ENST00000430808 296 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 GAPDHP48-201ENST00000436626 961 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 RN7SL570P-201ENST00000484405 292 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC114781.3-201ENST00000512083 142 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC068305.2-201ENST00000550567 1205 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC134669.1-201ENST00000581275 672 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC079315.1-201ENST00000602952 623 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC067773.1-201ENST00000603284 1094 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 CXADRP3-202ENST00000617265 1100 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AL035661.1-201ENST00000620459 1144 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 FO681491.1-202ENST00000623392 737 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 OR8G3P-202ENST00000641572 1255 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 AC006484.1-201ENST00000435086 1884 ntBASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC65Q8IXS2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AP005435.3-201ENST00000531260 3198 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 RNU1-136P-201ENST00000384181 164 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 MIR130A-201ENST00000385274 89 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 NIFKP3-201ENST00000417799 865 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC115283.1-201ENST00000427353 400 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC242426.1-201ENST00000435270 960 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 RPS17P15-201ENST00000475609 349 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 RPS7P6-201ENST00000485777 579 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 DUTP1-201ENST00000493631 470 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 RN7SKP70-201ENST00000516655 271 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 SCARNA6.1-201ENST00000516989 238 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 ZNF322P1-201ENST00000568013 1209 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AL138895.2-201ENST00000603019 178 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AL499605.1-201ENST00000604628 403 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC022919.1-201ENST00000624979 626 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC016745.2-201ENST00000608834 3443 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC011933.2-201ENST00000578539 2790 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 AC007842.1-201ENST00000597336 2039 ntBASIC6.37□□□□□ -1.39
CCDC65Q8IXS2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms