Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.53□□□□□ -1.68
SSSCA1O60232 PPIAP7-201ENST00000454070 489 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.53□□□□□ -1.68
SSSCA1O60232 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSSCA1O60232 AC114324.2-202ENST00000503812 134 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 AC074255.1-201ENST00000511259 501 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 IGLV3-24-201ENST00000517477 197 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 AC139365.2-201ENST00000517972 253 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.53□□□□□ -1.68
SSSCA1O60232 AC131935.1-201ENST00000524621 333 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 AP000620.1-201ENST00000527147 504 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.53□□□□□ -1.68
SSSCA1O60232 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.53□□□□□ -1.68
SSSCA1O60232 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SSSCA1O60232 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.53□□□□□ -1.68
SSSCA1O60232 AC127024.5-201ENST00000580085 462 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.53□□□□□ -1.68
SSSCA1O60232 GAPDHP41-201ENST00000613707 975 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 FAM27E2-201ENST00000619668 403 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 AC091932.2-201ENST00000623014 291 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.53□□□□□ -1.68
SSSCA1O60232 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.53□□□□□ -1.68
SSSCA1O60232 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SSSCA1O60232 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSSCA1O60232 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSSCA1O60232 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSSCA1O60232 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
SSSCA1O60232 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SSSCA1O60232 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSSCA1O60232 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSSCA1O60232 LINC01613-201ENST00000561476 2780 ntBASIC4.53□□□□□ -1.68
SSSCA1O60232 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.53□□□□□ -1.68
SSSCA1O60232 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
SSSCA1O60232 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AC027088.4-201ENST00000611559 1947 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SSSCA1O60232 PSG10P-201ENST00000501199 1500 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.52□□□□□ -1.69
SSSCA1O60232 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSSCA1O60232 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 PPIAP9-201ENST00000403866 498 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 RN7SKP29-201ENST00000410957 272 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 RPS6P23-201ENST00000413224 722 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.52□□□□□ -1.69
SSSCA1O60232 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 GAPDHP19-201ENST00000431768 1005 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.52□□□□□ -1.69
SSSCA1O60232 GAPDHP48-201ENST00000436626 961 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 ARMC4P1-201ENST00000438905 707 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 WDR82P2-201ENST00000444540 928 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AC245028.2-201ENST00000458673 253 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.52□□□□□ -1.69
SSSCA1O60232 ASNSP4-201ENST00000511103 447 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 GAPDHP71-201ENST00000511530 1003 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 AC009879.1-201ENST00000520029 839 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 SLC25A51P2-201ENST00000535708 889 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AC010487.1-201ENST00000594408 1172 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 AC108738.1-201ENST00000603703 237 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.52□□□□□ -1.69
SSSCA1O60232 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.52□□□□□ -1.69
SSSCA1O60232 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.52□□□□□ -1.69
SSSCA1O60232 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SSSCA1O60232 AL450345.1-202ENST00000605741 3881 ntBASIC4.52□□□□□ -1.69
SSSCA1O60232 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SSSCA1O60232 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSSCA1O60232 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.51□□□□□ -1.69
SSSCA1O60232 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SSSCA1O60232 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SSSCA1O60232 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC007618.1-201ENST00000366455 732 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.51□□□□□ -1.69
SSSCA1O60232 MIR188-201ENST00000385034 86 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 ARSFP1-201ENST00000398758 477 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 RPSAP35-201ENST00000413753 818 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 CLCN3P1-201ENST00000423965 1017 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms