Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 MIR550A3-201ENST00000390735 95 ntBASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 RN7SKP279-201ENST00000411383 298 ntBASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 RPL7P61-201ENST00000451721 751 ntBASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 RPL17P2-201ENST00000491913 451 ntBASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 EIF4A2P5-201ENST00000529914 499 ntBASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 AL034408.1-201ENST00000637712 664 ntBASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CCDC141Q6ZP82 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 ZNF840P-201ENST00000504759 1996 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 DUTP5-201ENST00000406790 469 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 AC007161.1-204ENST00000423039 460 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 RPS7P6-201ENST00000485777 579 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 AC069307.1-201ENST00000602820 447 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 AL049539.1-201ENST00000611964 459 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 LINC01739-205ENST00000641890 573 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 MAPK10-338ENST00000641647 3362 ntBASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.35□□□□□ -1.07
CCDC141Q6ZP82 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 SNORA67-201ENST00000384423 137 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 RN7SKP216-201ENST00000411050 312 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 SRSF1P1-201ENST00000424058 520 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 AL365220.1-201ENST00000432923 399 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 RN7SKP99-201ENST00000517028 307 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 AC090510.2-201ENST00000617465 629 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 AL034549.2-201ENST00000618285 3373 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 AL162456.1-201ENST00000634535 2006 ntBASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC141Q6ZP82 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 AC103591.2-201ENST00000265259 766 ntBASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 AL645733.1-201ENST00000402250 217 ntBASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 AC091685.2-201ENST00000454924 864 ntBASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 AC078899.1-201ENST00000521432 1185 ntBASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 HMGB1P40-201ENST00000525121 540 ntBASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 AL596275.2-208ENST00000641192 594 ntBASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 OLMALINC-203ENST00000641087 3779 ntBASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC8.33□□□□□ -1.08
CCDC141Q6ZP82 ZNF101P1-201ENST00000435701 1720 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 RNA5SP443-201ENST00000363083 132 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 RNA5SP326-201ENST00000363209 110 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 SNORD1C-201ENST00000363315 78 ntBASIC8.32□□□□□ -1.08
CCDC141Q6ZP82 RNU1-149P-201ENST00000390870 161 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms