Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
HTTP42858 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
HTTP42858 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 AC007996.1-201ENST00000620414 2821 ntBASIC5.96□□□□□ -1.45
HTTP42858 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.96□□□□□ -1.46
HTTP42858 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HTTP42858 AK3P5-201ENST00000432033 519 ntBASIC5.96□□□□□ -1.46
HTTP42858 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC5.96□□□□□ -1.46
HTTP42858 DHFRP1-201ENST00000579682 559 ntBASIC5.96□□□□□ -1.46
HTTP42858 MIR6716-201ENST00000613413 80 ntBASIC5.96□□□□□ -1.46
HTTP42858 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.96□□□□□ -1.46
HTTP42858 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.96□□□□□ -1.46
HTTP42858 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.96□□□□□ -1.46
HTTP42858 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HTTP42858 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
HTTP42858 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.96□□□□□ -1.46
HTTP42858 OR9G4-201ENST00000302957 984 ntBASIC5.96□□□□□ -1.46
HTTP42858 RNU2-50P-201ENST00000410494 143 ntBASIC5.96□□□□□ -1.46
HTTP42858 HSPD1P12-201ENST00000429127 1069 ntBASIC5.96□□□□□ -1.46
HTTP42858 RPL7AP10-201ENST00000481016 791 ntBASIC5.96□□□□□ -1.46
HTTP42858 MORF4L1P3-201ENST00000525966 950 ntBASIC5.96□□□□□ -1.46
HTTP42858 TVP23CP2-201ENST00000571473 623 ntBASIC5.96□□□□□ -1.46
HTTP42858 MIR4429-201ENST00000580105 73 ntBASIC5.96□□□□□ -1.46
HTTP42858 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.96□□□□□ -1.46
HTTP42858 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HTTP42858 AC003973.3-201ENST00000624863 2822 ntBASIC5.96□□□□□ -1.46
HTTP42858 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HTTP42858 TRBV5-2-201ENST00000489095 273 ntBASIC5.95□□□□□ -1.46
HTTP42858 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 RNA5SP43-201ENST00000516559 110 ntBASIC5.95□□□□□ -1.46
HTTP42858 HMGB1P23-201ENST00000518743 568 ntBASIC5.95□□□□□ -1.46
HTTP42858 AC026688.1-201ENST00000520639 1168 ntBASIC5.95□□□□□ -1.46
HTTP42858 AGGF1P7-201ENST00000562369 913 ntBASIC5.95□□□□□ -1.46
HTTP42858 AC005341.1-201ENST00000571086 708 ntBASIC5.95□□□□□ -1.46
HTTP42858 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 AC010928.1-201ENST00000592477 1447 ntBASIC5.95□□□□□ -1.46
HTTP42858 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 FAM32BP-201ENST00000344033 333 ntBASIC5.95□□□□□ -1.46
HTTP42858 RNA5SP388-201ENST00000362584 119 ntBASIC5.95□□□□□ -1.46
HTTP42858 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HTTP42858 AC004074.1-201ENST00000421810 1063 ntBASIC5.95□□□□□ -1.46
HTTP42858 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.95□□□□□ -1.46
HTTP42858 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 BNIP3P33-201ENST00000598912 569 ntBASIC5.95□□□□□ -1.46
HTTP42858 AC005962.2-201ENST00000611427 652 ntBASIC5.95□□□□□ -1.46
HTTP42858 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC5.95□□□□□ -1.46
HTTP42858 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
HTTP42858 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.95□□□□□ -1.46
HTTP42858 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HTTP42858 LINC01881-201ENST00000416103 412 ntBASIC5.94□□□□□ -1.46
HTTP42858 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.94□□□□□ -1.46
HTTP42858 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.94□□□□□ -1.46
HTTP42858 AP001781.1-201ENST00000530977 207 ntBASIC5.94□□□□□ -1.46
HTTP42858 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.94□□□□□ -1.46
HTTP42858 MIR3667-201ENST00000581025 74 ntBASIC5.94□□□□□ -1.46
HTTP42858 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.94□□□□□ -1.46
HTTP42858 AC092653.1-201ENST00000608509 531 ntBASIC5.94□□□□□ -1.46
HTTP42858 AP003789.1-201ENST00000617737 605 ntBASIC5.94□□□□□ -1.46
HTTP42858 DHX40P1-201ENST00000588725 1412 ntBASIC5.94□□□□□ -1.46
HTTP42858 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.94□□□□□ -1.46
HTTP42858 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC5.94□□□□□ -1.46
HTTP42858 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HTTP42858 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.94□□□□□ -1.46
HTTP42858 AC009948.3-201ENST00000603415 1798 ntBASIC5.94□□□□□ -1.46
HTTP42858 MIR1182-201ENST00000408363 97 ntBASIC5.94□□□□□ -1.46
HTTP42858 RNU4-25P-201ENST00000410569 230 ntBASIC5.94□□□□□ -1.46
HTTP42858 TMEM183AP1-205ENST00000432739 290 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms