Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.55□□□□□ -1.52
NKX2-2O95096 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NKX2-2O95096 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.55□□□□□ -1.52
NKX2-2O95096 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC130304.1-201ENST00000622942 2385 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 AC073365.1-203ENST00000641055 1992 ntBASIC5.55□□□□□ -1.52
NKX2-2O95096 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NKX2-2O95096 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NKX2-2O95096 AC008627.1-201ENST00000517511 1704 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-2O95096 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 RPL10P10-201ENST00000403509 664 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 RPL35AP3-201ENST00000414680 288 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-2O95096 AC245517.2-201ENST00000442890 346 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC019084.1-201ENST00000457337 432 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC009963.3-201ENST00000458090 486 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC023245.1-201ENST00000468501 517 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.54□□□□□ -1.52
NKX2-2O95096 AL158068.1-201ENST00000506116 616 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-2O95096 TOMM22P4-201ENST00000511318 336 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 RN7SKP288-201ENST00000516227 268 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 RN7SKP35-201ENST00000517210 151 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.54□□□□□ -1.52
NKX2-2O95096 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NKX2-2O95096 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.54□□□□□ -1.52
NKX2-2O95096 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.54□□□□□ -1.52
NKX2-2O95096 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-2O95096 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-2O95096 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NKX2-2O95096 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.54□□□□□ -1.52
NKX2-2O95096 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 AC005021.1-201ENST00000608730 355 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC092266.1-201ENST00000610958 165 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC004801.6-201ENST00000616571 978 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-2O95096 AL591926.1-201ENST00000620542 217 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 MIR6806-201ENST00000622141 64 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AL138960.2-201ENST00000625145 535 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC110792.3-201ENST00000595906 1614 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
NKX2-2O95096 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 AC012254.3-201ENST00000591183 2117 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.54□□□□□ -1.52
NKX2-2O95096 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-2O95096 AL354854.1-201ENST00000455940 1363 ntBASIC5.54□□□□□ -1.52
NKX2-2O95096 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX2-2O95096 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NKX2-2O95096 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 AC005224.3-201ENST00000584683 2140 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
NKX2-2O95096 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-2O95096 MIR130B-202ENST00000385018 82 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NKX2-2O95096 AL356057.1-202ENST00000402263 756 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 AC019205.1-201ENST00000421830 730 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 AC099677.3-201ENST00000427081 395 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX2-2O95096 RPS3AP38-201ENST00000435889 763 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 RPS7P3-201ENST00000443360 580 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 RPL6P30-201ENST00000443382 862 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX2-2O95096 CABYRP1-201ENST00000465493 1045 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 RPSAP39-201ENST00000467439 883 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 AC098583.1-201ENST00000480875 255 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 AC093663.2-201ENST00000484625 313 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 PSMA2P2-201ENST00000504319 686 ntBASIC5.53□□□□□ -1.52
NKX2-2O95096 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX2-2O95096 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX2-2O95096 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX2-2O95096 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX2-2O95096 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX2-2O95096 RN7SKP34-201ENST00000516142 244 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms