Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 AL133243.4-201ENST00000623116 3109 ntBASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.52□□□□□ -1.21
NPAS4Q8IUM7 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 TPTE2P2-201ENST00000403471 1466 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 CDC27P2-201ENST00000425026 1922 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 RNU6-729P-201ENST00000384399 107 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC104297.1-201ENST00000393779 870 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 VN1R12P-201ENST00000403778 876 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 BTF3L4P1-201ENST00000413813 468 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 TIMM9P2-201ENST00000419324 266 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AL035407.1-201ENST00000429211 571 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AL121916.1-201ENST00000429405 308 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 CDY14P-201ENST00000431260 1014 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 NPM1P49-201ENST00000448027 714 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 CDY23P-201ENST00000451661 1014 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AL109741.2-201ENST00000455561 343 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC115223.1-201ENST00000466377 870 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 RN7SL160P-201ENST00000468558 284 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 BZW1P2-201ENST00000473537 826 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 SAA3P-201ENST00000533267 365 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC121758.1-202ENST00000556917 658 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC103987.3-201ENST00000582071 292 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AL163642.2-201ENST00000604722 1019 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 U6.107-201ENST00000637108 79 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 AC009108.3-201ENST00000602739 3515 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS4Q8IUM7 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS4Q8IUM7 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms