RNA–Protein interactions for RNA: ENST00000448027.1

NPM1P49-201, Transcript of nucleophosmin 1 pseudogene 49, humanhuman

BASIC

Gene NPM1P49, Length 714 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P49-201ENST00000448027 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
NPM1P49-201ENST00000448027 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
NPM1P49-201ENST00000448027 SENP3Q9H4L4 574 aaPredicted RBP25.84■■□□□ 1.73
NPM1P49-201ENST00000448027 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
NPM1P49-201ENST00000448027 FOXD1Q16676 465 aa24.07■■□□□ 1.44
NPM1P49-201ENST00000448027 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
NPM1P49-201ENST00000448027 MSH5O43196 834 aa22.65■■□□□ 1.22
NPM1P49-201ENST00000448027 PIAS4Q8N2W9 510 aaPredicted RBP22.51■■□□□ 1.19
NPM1P49-201ENST00000448027 POTEDQ86YR6 584 aa22.45■■□□□ 1.18
NPM1P49-201ENST00000448027 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
NPM1P49-201ENST00000448027 ADRA2BP18089 450 aa22.29■■□□□ 1.16
NPM1P49-201ENST00000448027 MAPK8IP2Q13387 824 aaPredicted RBP20.52■□□□□ 0.88
NPM1P49-201ENST00000448027 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
NPM1P49-201ENST00000448027 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
NPM1P49-201ENST00000448027 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
NPM1P49-201ENST00000448027 DCAF8L1A6NGE4 600 aa19.75■□□□□ 0.75
NPM1P49-201ENST00000448027 CACNB1Q02641 598 aaPredicted RBP19.62■□□□□ 0.73
NPM1P49-201ENST00000448027 HOXD11P31277 338 aaPredicted RBP19.56■□□□□ 0.72
NPM1P49-201ENST00000448027 CNKSR2Q8WXI2 1034 aa19.53■□□□□ 0.72
NPM1P49-201ENST00000448027 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
NPM1P49-201ENST00000448027 RNF39Q9H2S5 420 aa19.27■□□□□ 0.68
NPM1P49-201ENST00000448027 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
NPM1P49-201ENST00000448027 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
NPM1P49-201ENST00000448027 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
NPM1P49-201ENST00000448027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
NPM1P49-201ENST00000448027 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
NPM1P49-201ENST00000448027 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
NPM1P49-201ENST00000448027 KCNA4P22459 653 aa18.19■□□□□ 0.5
NPM1P49-201ENST00000448027 CAPN15O75808 1086 aa18.13■□□□□ 0.49
NPM1P49-201ENST00000448027 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
NPM1P49-201ENST00000448027 DSG3P32926 999 aa17.98■□□□□ 0.47
NPM1P49-201ENST00000448027 SLC4A2P04920 1241 aa17.91■□□□□ 0.46
NPM1P49-201ENST00000448027 APLP2Q06481 763 aa17.81■□□□□ 0.44
NPM1P49-201ENST00000448027 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
NPM1P49-201ENST00000448027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
NPM1P49-201ENST00000448027 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
NPM1P49-201ENST00000448027 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
NPM1P49-201ENST00000448027 ABCB7O75027 752 aa17.68■□□□□ 0.42
NPM1P49-201ENST00000448027 SAMD1Q6SPF0 538 aaPredicted RBP17.6■□□□□ 0.41
NPM1P49-201ENST00000448027 POTEHQ6S545 545 aa17.57■□□□□ 0.4
NPM1P49-201ENST00000448027 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
NPM1P49-201ENST00000448027 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
NPM1P49-201ENST00000448027 POLA2Q14181 598 aa17.22■□□□□ 0.35
NPM1P49-201ENST00000448027 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
NPM1P49-201ENST00000448027 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
NPM1P49-201ENST00000448027 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
NPM1P49-201ENST00000448027 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
NPM1P49-201ENST00000448027 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
NPM1P49-201ENST00000448027 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
NPM1P49-201ENST00000448027 ZBTB22O15209 634 aa16.68■□□□□ 0.26
NPM1P49-201ENST00000448027 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
NPM1P49-201ENST00000448027 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
NPM1P49-201ENST00000448027 ATXN8OSP0DMR3 200 aa16.53■□□□□ 0.24
NPM1P49-201ENST00000448027 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
NPM1P49-201ENST00000448027 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
NPM1P49-201ENST00000448027 FBLN2P98095 1184 aa16.39■□□□□ 0.21
NPM1P49-201ENST00000448027 SP7Q8TDD2 431 aaPredicted RBP16.37■□□□□ 0.21
NPM1P49-201ENST00000448027 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
NPM1P49-201ENST00000448027 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
NPM1P49-201ENST00000448027 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
NPM1P49-201ENST00000448027 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
NPM1P49-201ENST00000448027 HAX1O00165 279 aa16.27■□□□□ 0.2
NPM1P49-201ENST00000448027 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
NPM1P49-201ENST00000448027 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
NPM1P49-201ENST00000448027 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
NPM1P49-201ENST00000448027 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
NPM1P49-201ENST00000448027 PRKAR2AP13861 404 aaKnown RBP16.03■□□□□ 0.16
NPM1P49-201ENST00000448027 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
NPM1P49-201ENST00000448027 EVX2Q03828 476 aa15.95■□□□□ 0.14
NPM1P49-201ENST00000448027 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
NPM1P49-201ENST00000448027 PRR29P0C7W0 189 aa15.81■□□□□ 0.12
NPM1P49-201ENST00000448027 CHADLQ6NUI6 762 aa15.8■□□□□ 0.12
NPM1P49-201ENST00000448027 C19orf67A6NJJ6 358 aa15.78■□□□□ 0.12
NPM1P49-201ENST00000448027 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
NPM1P49-201ENST00000448027 GABBR2O75899 941 aa15.62■□□□□ 0.09
NPM1P49-201ENST00000448027 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
NPM1P49-201ENST00000448027 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
NPM1P49-201ENST00000448027 CD44P16070 742 aaKnown RBP15.51■□□□□ 0.07
NPM1P49-201ENST00000448027 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
NPM1P49-201ENST00000448027 LHX8Q68G74 356 aa15.37■□□□□ 0.05
NPM1P49-201ENST00000448027 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
NPM1P49-201ENST00000448027 CLCN6P51797 869 aa15.3■□□□□ 0.04
NPM1P49-201ENST00000448027 CREBZFQ9NS37 354 aa15.29■□□□□ 0.04
NPM1P49-201ENST00000448027 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
NPM1P49-201ENST00000448027 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
NPM1P49-201ENST00000448027 DCBLD2Q96PD2 775 aa15.23■□□□□ 0.03
NPM1P49-201ENST00000448027 ZNF579Q8NAF0 562 aaKnown RBP15.21■□□□□ 0.03
NPM1P49-201ENST00000448027 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
NPM1P49-201ENST00000448027 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
NPM1P49-201ENST00000448027 GALR2O43603 387 aaPredicted RBP15.05■□□□□ -0
NPM1P49-201ENST00000448027 PHF12Q96QT6 1004 aa15.02■□□□□ -0
NPM1P49-201ENST00000448027 MNX1P50219 401 aaPredicted RBP14.95□□□□□ -0.02
NPM1P49-201ENST00000448027 PROM2Q8N271 834 aa14.82□□□□□ -0.04
NPM1P49-201ENST00000448027 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
NPM1P49-201ENST00000448027 MS4A3Q96HJ5 214 aa14.8□□□□□ -0.04
NPM1P49-201ENST00000448027 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
NPM1P49-201ENST00000448027 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
NPM1P49-201ENST00000448027 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
NPM1P49-201ENST00000448027 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
NPM1P49-201ENST00000448027 ASTLQ6HA08 431 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms