Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 OR11H3P-201ENST00000554547 982 ntBASIC6.76□□□□□ -1.33
COL4A1P02462 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.76□□□□□ -1.33
COL4A1P02462 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A1P02462 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A1P02462 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A1P02462 AL450226.2-201ENST00000622913 439 ntBASIC6.76□□□□□ -1.33
COL4A1P02462 AC135068.5-201ENST00000624197 983 ntBASIC6.76□□□□□ -1.33
COL4A1P02462 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.76□□□□□ -1.33
COL4A1P02462 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.76□□□□□ -1.33
COL4A1P02462 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A1P02462 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A1P02462 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A1P02462 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A1P02462 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL4A1P02462 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL4A1P02462 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A1P02462 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL4A1P02462 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 RNU1-43P-201ENST00000365052 165 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL4A1P02462 MIR550A3-201ENST00000390735 95 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A1P02462 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A1P02462 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 AC006115.2-201ENST00000596823 202 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.75□□□□□ -1.33
COL4A1P02462 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A1P02462 AL121612.2-201ENST00000612261 482 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A1P02462 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
COL4A1P02462 AC140479.2-201ENST00000421567 3130 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL4A1P02462 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.75□□□□□ -1.33
COL4A1P02462 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL4A1P02462 AL589993.1-201ENST00000407450 2524 ntBASIC6.75□□□□□ -1.33
COL4A1P02462 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.75□□□□□ -1.33
COL4A1P02462 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.75□□□□□ -1.33
COL4A1P02462 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
COL4A1P02462 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL4A1P02462 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 U3.36-201ENST00000408418 213 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 RBMY2QP-201ENST00000429799 1147 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.74□□□□□ -1.33
COL4A1P02462 AL596266.1-201ENST00000448132 400 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 AC073850.1-201ENST00000449243 255 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.74□□□□□ -1.33
COL4A1P02462 AP004607.2-201ENST00000533949 322 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 AL390726.5-202ENST00000564800 256 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.74□□□□□ -1.33
COL4A1P02462 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL4A1P02462 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 AC083899.1-201ENST00000454465 3819 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.74□□□□□ -1.33
COL4A1P02462 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL4A1P02462 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 H2AFZP6-201ENST00000444403 394 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 RPS18P6-201ENST00000476880 458 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.74□□□□□ -1.33
COL4A1P02462 AC006116.3-201ENST00000592968 361 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.74□□□□□ -1.33
COL4A1P02462 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.74□□□□□ -1.33
COL4A1P02462 AC087385.3-201ENST00000620477 187 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 AP001784.1-201ENST00000624107 428 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 MAPK10-350ENST00000641777 965 ntBASIC6.74□□□□□ -1.33
COL4A1P02462 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL4A1P02462 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 HSPD1P7-201ENST00000447985 1686 ntBASIC6.73□□□□□ -1.33
COL4A1P02462 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
COL4A1P02462 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL4A1P02462 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms