Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 AP001437.1-201ENST00000608783 456 ntBASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 AC019193.2-201ENST00000610012 634 ntBASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 RNVU1-19-201ENST00000613023 167 ntBASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 AL158209.2-201ENST00000619266 216 ntBASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 AC016582.1-202ENST00000636341 2982 ntBASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 AL121835.2-201ENST00000624253 3502 ntBASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.62□□□□□ -1.19
CUEDC1Q9NWM3 PHF2P2-202ENST00000444553 2865 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AL022578.1-201ENST00000439330 1433 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC093225.1-201ENST00000506867 1408 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC007342.7-201ENST00000624610 2337 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 OR7E25P-202ENST00000641088 5937 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 RN7SKP50-201ENST00000364694 315 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 YAP1P2-201ENST00000455104 610 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC108688.1-201ENST00000485817 713 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 MTND4LP22-201ENST00000508209 276 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC008837.2-201ENST00000513076 418 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 EIF3KP1-201ENST00000513279 656 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AL121821.2-201ENST00000556081 394 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 MIR3912-201ENST00000577566 105 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 RN7SL25P-201ENST00000583862 260 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 BNIP3P22-201ENST00000593399 556 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC023513.1-201ENST00000604396 691 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AL713922.2-201ENST00000619384 716 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 TRAF6P1-201ENST00000429404 1558 ntBASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CUEDC1Q9NWM3 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms