Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL591167.1-201ENST00000607321 456 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC022106.1-201ENST00000612834 766 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL357153.4-201ENST00000620487 1016 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC129915.3-201ENST00000634128 948 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MIR4302-201ENST00000638058 60 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC004076.2-201ENST00000620532 3323 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC024651.2-201ENST00000562480 2098 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC092451.3-201ENST00000625067 1343 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 RN7SKP121-201ENST00000410842 305 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 CDY8P-201ENST00000428380 1279 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AL136455.1-201ENST00000441083 1240 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 GAPDHP23-201ENST00000444823 993 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 CDY20P-201ENST00000447528 1279 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 SEPT14P1-201ENST00000458703 648 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC060775.1-201ENST00000518241 520 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 BX323046.1-201ENST00000610145 535 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC129778.1-202ENST00000623812 261 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AP003072.5-201ENST00000623872 773 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AL591379.1-207ENST00000635982 261 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AL449283.1-201ENST00000602631 3403 ntBASIC5.57□□□□□ -1.52
CCDC71Q8IV32 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC71Q8IV32 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC024587.1-201ENST00000505925 2157 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC016583.1-201ENST00000624221 2431 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 UGT2B24P-201ENST00000514441 1597 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 CASC19-238ENST00000641523 1558 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 RNU1-134P-201ENST00000362935 165 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 SNORA51.1-201ENST00000363243 140 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 RN7SKP81-201ENST00000365603 331 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AL512422.1-201ENST00000407033 553 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 RN7SKP206-201ENST00000410823 293 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 AC017078.1-201ENST00000416146 368 ntBASIC5.56□□□□□ -1.52
CCDC71Q8IV32 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC71Q8IV32 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms