Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.04□□□□□ -1.28
NID1P14543 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.04□□□□□ -1.28
NID1P14543 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.04□□□□□ -1.28
NID1P14543 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.04□□□□□ -1.28
NID1P14543 PDCL3P1-201ENST00000534575 734 ntBASIC7.04□□□□□ -1.28
NID1P14543 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC7.04□□□□□ -1.28
NID1P14543 AP000619.1-201ENST00000540293 1000 ntBASIC7.04□□□□□ -1.28
NID1P14543 NDFIP1P1-201ENST00000543144 525 ntBASIC7.04□□□□□ -1.28
NID1P14543 NPIPP1-203ENST00000547107 1071 ntBASIC7.04□□□□□ -1.28
NID1P14543 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.04□□□□□ -1.28
NID1P14543 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.04□□□□□ -1.28
NID1P14543 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.04□□□□□ -1.28
NID1P14543 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.04□□□□□ -1.28
NID1P14543 ULK4P2-202ENST00000564187 492 ntBASIC7.04□□□□□ -1.28
NID1P14543 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.04□□□□□ -1.28
NID1P14543 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.04□□□□□ -1.28
NID1P14543 AC005726.4-201ENST00000582858 458 ntBASIC7.04□□□□□ -1.28
NID1P14543 MIR548AB-201ENST00000584917 84 ntBASIC7.04□□□□□ -1.28
NID1P14543 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.04□□□□□ -1.28
NID1P14543 AL078623.1-201ENST00000602702 907 ntBASIC7.04□□□□□ -1.28
NID1P14543 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.04□□□□□ -1.28
NID1P14543 MIR6731-201ENST00000614863 72 ntBASIC7.04□□□□□ -1.28
NID1P14543 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.04□□□□□ -1.28
NID1P14543 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.04□□□□□ -1.28
NID1P14543 AL445264.1-201ENST00000621719 171 ntBASIC7.04□□□□□ -1.28
NID1P14543 AL451054.1-201ENST00000621770 772 ntBASIC7.04□□□□□ -1.28
NID1P14543 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.04□□□□□ -1.28
NID1P14543 AC087821.2-201ENST00000637086 450 ntBASIC7.04□□□□□ -1.28
NID1P14543 RPL36AP21-202ENST00000639134 430 ntBASIC7.04□□□□□ -1.28
NID1P14543 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.04□□□□□ -1.28
NID1P14543 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
NID1P14543 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.04□□□□□ -1.28
NID1P14543 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NID1P14543 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.04□□□□□ -1.28
NID1P14543 AC073055.1-201ENST00000456901 1621 ntBASIC7.04□□□□□ -1.28
NID1P14543 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NID1P14543 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NID1P14543 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NID1P14543 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NID1P14543 AC090132.1-201ENST00000524071 1480 ntBASIC7.04□□□□□ -1.28
NID1P14543 OR7E11P-202ENST00000642027 1491 ntBASIC7.04□□□□□ -1.28
NID1P14543 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NID1P14543 AL162171.3-201ENST00000617439 3178 ntBASIC7.04□□□□□ -1.28
NID1P14543 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.04□□□□□ -1.28
NID1P14543 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.04□□□□□ -1.28
NID1P14543 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC7.03□□□□□ -1.28
NID1P14543 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
NID1P14543 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NID1P14543 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.03□□□□□ -1.28
NID1P14543 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 RNU5F-7P-201ENST00000363696 115 ntBASIC7.03□□□□□ -1.28
NID1P14543 RNU6-1251P-201ENST00000364502 107 ntBASIC7.03□□□□□ -1.28
NID1P14543 RN7SKP257-201ENST00000364525 309 ntBASIC7.03□□□□□ -1.28
NID1P14543 RAC1P4-201ENST00000419413 579 ntBASIC7.03□□□□□ -1.28
NID1P14543 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.03□□□□□ -1.28
NID1P14543 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AC007435.1-201ENST00000421086 415 ntBASIC7.03□□□□□ -1.28
NID1P14543 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AC104843.2-201ENST00000427666 297 ntBASIC7.03□□□□□ -1.28
NID1P14543 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 PYHIN5P-201ENST00000431627 723 ntBASIC7.03□□□□□ -1.28
NID1P14543 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 AL606752.1-201ENST00000435442 666 ntBASIC7.03□□□□□ -1.28
NID1P14543 AC231532.1-201ENST00000438584 312 ntBASIC7.03□□□□□ -1.28
NID1P14543 AL512286.1-201ENST00000439244 400 ntBASIC7.03□□□□□ -1.28
NID1P14543 AL137074.1-201ENST00000442640 465 ntBASIC7.03□□□□□ -1.28
NID1P14543 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 SCDP1-201ENST00000455244 1081 ntBASIC7.03□□□□□ -1.28
NID1P14543 RN7SL870P-201ENST00000460111 296 ntBASIC7.03□□□□□ -1.28
NID1P14543 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AC079768.1-201ENST00000503181 711 ntBASIC7.03□□□□□ -1.28
NID1P14543 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.03□□□□□ -1.28
NID1P14543 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC7.03□□□□□ -1.28
NID1P14543 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 AC022690.1-201ENST00000526681 550 ntBASIC7.03□□□□□ -1.28
NID1P14543 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.03□□□□□ -1.28
NID1P14543 NPIPB14P-203ENST00000532298 987 ntBASIC7.03□□□□□ -1.28
NID1P14543 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AC011611.6-201ENST00000547483 255 ntBASIC7.03□□□□□ -1.28
NID1P14543 AC008127.2-201ENST00000549925 1075 ntBASIC7.03□□□□□ -1.28
NID1P14543 GTF2IP22-201ENST00000554443 182 ntBASIC7.03□□□□□ -1.28
NID1P14543 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NID1P14543 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.03□□□□□ -1.28
NID1P14543 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC7.03□□□□□ -1.28
NID1P14543 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.03□□□□□ -1.28
NID1P14543 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms