Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 AC139697.1-201ENST00000548429 745 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 MIR7641-1-201ENST00000627518 61 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 CDY5P-201ENST00000411487 1580 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 CDY9P-201ENST00000451397 1580 ntBASIC9.39□□□□□ -0.91
TOPBP1Q92547 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.39□□□□□ -0.91
TOPBP1Q92547 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TOPBP1Q92547 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 CDC123-202ENST00000378900 933 ntTSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 AL590139.1-201ENST00000416267 400 ntBASIC9.38□□□□□ -0.91
TOPBP1Q92547 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 RPS23P2-201ENST00000463671 415 ntBASIC9.38□□□□□ -0.91
TOPBP1Q92547 AC096741.1-201ENST00000472250 846 ntBASIC9.38□□□□□ -0.91
TOPBP1Q92547 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 AC024940.3-201ENST00000538551 316 ntBASIC9.38□□□□□ -0.91
TOPBP1Q92547 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 AC095055.1-201ENST00000603472 1113 ntBASIC9.38□□□□□ -0.91
TOPBP1Q92547 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 INTS6P1-201ENST00000504674 2530 ntBASIC9.38□□□□□ -0.91
TOPBP1Q92547 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
TOPBP1Q92547 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
TOPBP1Q92547 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 MIR551A-201ENST00000385042 96 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 AL133388.1-201ENST00000404509 287 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 OR4K12P-201ENST00000406538 961 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 RN7SL459P-201ENST00000481078 302 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 RN7SKP147-201ENST00000517154 244 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 PCNPP1-201ENST00000552501 511 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 AC209154.1-201ENST00000582156 337 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 AL353662.3-201ENST00000625131 237 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 POT1-202ENST00000393329 3950 ntTSL 5 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 OR9K1P-202ENST00000641111 3217 ntBASIC9.37□□□□□ -0.91
TOPBP1Q92547 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
TOPBP1Q92547 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
TOPBP1Q92547 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC126755.2-208ENST00000327792 462 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC138969.1-213ENST00000331436 462 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 MIR192-201ENST00000384915 110 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 RNU1-88P-201ENST00000459274 128 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 RMST-210ENST00000640149 2844 ntTSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms