Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SNORA51.1-201ENST00000363243 140 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 RNA5SP394-201ENST00000364216 119 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.93□□□□□ -1.62
COL8A2P25067 HMGB1P20-201ENST00000402555 677 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 OR2W4P-201ENST00000406496 926 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 SDHDP6-201ENST00000414693 480 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.93□□□□□ -1.62
COL8A2P25067 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.93□□□□□ -1.62
COL8A2P25067 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC4.93□□□□□ -1.62
COL8A2P25067 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 AP000281.1-201ENST00000444036 316 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.93□□□□□ -1.62
COL8A2P25067 RPS27AP2-201ENST00000457576 465 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AC023141.9-201ENST00000458734 412 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AL603882.1-201ENST00000463059 681 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
COL8A2P25067 RPSAP37-201ENST00000470913 821 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 NENFP3-201ENST00000503735 313 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AC109481.1-201ENST00000509173 282 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 TMEM97P2-201ENST00000517841 403 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.93□□□□□ -1.62
COL8A2P25067 AP003080.1-202ENST00000526526 915 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AP001804.1-201ENST00000526868 919 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.93□□□□□ -1.62
COL8A2P25067 OR4A6P-201ENST00000534364 970 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.93□□□□□ -1.62
COL8A2P25067 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.93□□□□□ -1.62
COL8A2P25067 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.93□□□□□ -1.62
COL8A2P25067 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.93□□□□□ -1.62
COL8A2P25067 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL8A2P25067 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.93□□□□□ -1.62
COL8A2P25067 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.93□□□□□ -1.62
COL8A2P25067 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COL8A2P25067 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.92□□□□□ -1.62
COL8A2P25067 AC018765.1-201ENST00000623357 3446 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 RN7SKP286-201ENST00000410894 299 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 AC093155.2-201ENST00000420734 937 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.92□□□□□ -1.62
COL8A2P25067 RPL34P3-201ENST00000421454 338 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.92□□□□□ -1.62
COL8A2P25067 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.92□□□□□ -1.62
COL8A2P25067 AC127526.2-201ENST00000426436 775 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 RPL34P27-201ENST00000428810 349 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.92□□□□□ -1.62
COL8A2P25067 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.92□□□□□ -1.62
COL8A2P25067 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COL8A2P25067 MIR2117-201ENST00000516780 80 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 SCARNA6.1-201ENST00000516989 238 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 SNORA43.3-201ENST00000517240 103 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.92□□□□□ -1.62
COL8A2P25067 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.92□□□□□ -1.62
COL8A2P25067 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.92□□□□□ -1.62
COL8A2P25067 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.92□□□□□ -1.62
COL8A2P25067 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.92□□□□□ -1.62
COL8A2P25067 RN7SL544P-201ENST00000617232 284 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 RN7SL763P-201ENST00000620922 284 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 AC021422.1-201ENST00000621212 473 ntBASIC4.92□□□□□ -1.62
COL8A2P25067 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.92□□□□□ -1.62
COL8A2P25067 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
COL8A2P25067 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC4.92□□□□□ -1.62
COL8A2P25067 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
COL8A2P25067 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
COL8A2P25067 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.92□□□□□ -1.62
COL8A2P25067 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL8A2P25067 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
COL8A2P25067 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.92□□□□□ -1.62
COL8A2P25067 AL591135.1-201ENST00000401578 5914 ntBASIC4.91□□□□□ -1.62
COL8A2P25067 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms