Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC142086.3-201ENST00000563896 802 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 RPL12P25-202ENST00000598100 674 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 TAS2R6P-201ENST00000605022 826 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC087588.2-201ENST00000617667 426 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 C2orf27A-204ENST00000623058 969 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AL118496.1-201ENST00000440201 1812 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 C3P1-202ENST00000497718 4954 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 RNA5SP88-201ENST00000365560 109 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 HMGB3P31-201ENST00000413333 595 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AL662791.3-201ENST00000413771 776 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 GAPDHP17-201ENST00000449858 1001 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC013429.1-201ENST00000456604 422 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC084017.1-201ENST00000483240 860 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC025271.1-201ENST00000485045 429 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC090096.1-201ENST00000489168 390 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AF131216.2-201ENST00000512316 564 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 RN7SKP70-201ENST00000516655 271 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 Y_RNA.711-201ENST00000516993 102 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC018630.1-201ENST00000541376 925 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AL135978.1-201ENST00000553618 1266 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC092868.1-201ENST00000557949 802 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AP001004.1-201ENST00000582468 324 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC004853.1-201ENST00000604902 698 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AL445670.1-201ENST00000618889 801 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC009248.2-201ENST00000619826 254 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 AC007603.3-201ENST00000636915 979 ntBASIC8.6□□□□□ -1.03
LRCH3Q96II8 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
LRCH3Q96II8 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms