RNA–Protein interactions for RNA: ENST00000582468.1

AP001004.1-201, humanhuman

BASIC

Gene AP001004.1, Length 324 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001004.1-201ENST00000582468 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
AP001004.1-201ENST00000582468 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
AP001004.1-201ENST00000582468 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
AP001004.1-201ENST00000582468 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
AP001004.1-201ENST00000582468 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
AP001004.1-201ENST00000582468 FOXD1Q16676 465 aa15.94■□□□□ 0.14
AP001004.1-201ENST00000582468 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
AP001004.1-201ENST00000582468 ADRA2BP18089 450 aa15.42■□□□□ 0.06
AP001004.1-201ENST00000582468 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
AP001004.1-201ENST00000582468 MSH5O43196 834 aa14.61□□□□□ -0.07
AP001004.1-201ENST00000582468 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
AP001004.1-201ENST00000582468 KCNA4P22459 653 aa14.09□□□□□ -0.15
AP001004.1-201ENST00000582468 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.17
AP001004.1-201ENST00000582468 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
AP001004.1-201ENST00000582468 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
AP001004.1-201ENST00000582468 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
AP001004.1-201ENST00000582468 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
AP001004.1-201ENST00000582468 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
AP001004.1-201ENST00000582468 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
AP001004.1-201ENST00000582468 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
AP001004.1-201ENST00000582468 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
AP001004.1-201ENST00000582468 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
AP001004.1-201ENST00000582468 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
AP001004.1-201ENST00000582468 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
AP001004.1-201ENST00000582468 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
AP001004.1-201ENST00000582468 ZBTB22O15209 634 aa13□□□□□ -0.33
AP001004.1-201ENST00000582468 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
AP001004.1-201ENST00000582468 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
AP001004.1-201ENST00000582468 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
AP001004.1-201ENST00000582468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
AP001004.1-201ENST00000582468 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
AP001004.1-201ENST00000582468 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
AP001004.1-201ENST00000582468 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
AP001004.1-201ENST00000582468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
AP001004.1-201ENST00000582468 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
AP001004.1-201ENST00000582468 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
AP001004.1-201ENST00000582468 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
AP001004.1-201ENST00000582468 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
AP001004.1-201ENST00000582468 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
AP001004.1-201ENST00000582468 APLP2Q06481 763 aa12.31□□□□□ -0.44
AP001004.1-201ENST00000582468 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
AP001004.1-201ENST00000582468 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
AP001004.1-201ENST00000582468 CAPN15O75808 1086 aa12.21□□□□□ -0.45
AP001004.1-201ENST00000582468 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
AP001004.1-201ENST00000582468 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
AP001004.1-201ENST00000582468 ABCB7O75027 752 aa12.02□□□□□ -0.49
AP001004.1-201ENST00000582468 POLA2Q14181 598 aa12□□□□□ -0.49
AP001004.1-201ENST00000582468 DSG3P32926 999 aa11.99□□□□□ -0.49
AP001004.1-201ENST00000582468 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
AP001004.1-201ENST00000582468 FBLN2P98095 1184 aa11.78□□□□□ -0.52
AP001004.1-201ENST00000582468 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
AP001004.1-201ENST00000582468 FKBP8Q14318 412 aa11.71□□□□□ -0.53
AP001004.1-201ENST00000582468 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
AP001004.1-201ENST00000582468 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
AP001004.1-201ENST00000582468 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
AP001004.1-201ENST00000582468 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
AP001004.1-201ENST00000582468 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
AP001004.1-201ENST00000582468 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.57
AP001004.1-201ENST00000582468 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
AP001004.1-201ENST00000582468 PROM2Q8N271 834 aa11.43□□□□□ -0.58
AP001004.1-201ENST00000582468 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
AP001004.1-201ENST00000582468 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
AP001004.1-201ENST00000582468 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
AP001004.1-201ENST00000582468 FBXO3Q9UK99 471 aa11.21□□□□□ -0.61
AP001004.1-201ENST00000582468 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
AP001004.1-201ENST00000582468 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
AP001004.1-201ENST00000582468 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
AP001004.1-201ENST00000582468 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
AP001004.1-201ENST00000582468 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
AP001004.1-201ENST00000582468 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
AP001004.1-201ENST00000582468 PRR29P0C7W0 189 aa10.98□□□□□ -0.65
AP001004.1-201ENST00000582468 IFNLR1Q8IU57 520 aaPredicted RBP10.97□□□□□ -0.65
AP001004.1-201ENST00000582468 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
AP001004.1-201ENST00000582468 MIER1Q8N108 512 aa10.95□□□□□ -0.66
AP001004.1-201ENST00000582468 POTEHQ6S545 545 aa10.91□□□□□ -0.66
AP001004.1-201ENST00000582468 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
AP001004.1-201ENST00000582468 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
AP001004.1-201ENST00000582468 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
AP001004.1-201ENST00000582468 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
AP001004.1-201ENST00000582468 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
AP001004.1-201ENST00000582468 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
AP001004.1-201ENST00000582468 CHADLQ6NUI6 762 aa10.83□□□□□ -0.68
AP001004.1-201ENST00000582468 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
AP001004.1-201ENST00000582468 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
AP001004.1-201ENST00000582468 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
AP001004.1-201ENST00000582468 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
AP001004.1-201ENST00000582468 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
AP001004.1-201ENST00000582468 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
AP001004.1-201ENST00000582468 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
AP001004.1-201ENST00000582468 NUBP1P53384 320 aa10.7□□□□□ -0.7
AP001004.1-201ENST00000582468 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
AP001004.1-201ENST00000582468 RASEFQ8IZ41 740 aa10.65□□□□□ -0.7
AP001004.1-201ENST00000582468 PKD2Q13563 968 aa10.64□□□□□ -0.71
AP001004.1-201ENST00000582468 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
AP001004.1-201ENST00000582468 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
AP001004.1-201ENST00000582468 DCAF8Q5TAQ9 597 aa10.57□□□□□ -0.72
AP001004.1-201ENST00000582468 GSE1Q14687 1217 aa10.56□□□□□ -0.72
AP001004.1-201ENST00000582468 ECM2O94769 699 aaPredicted RBP10.54□□□□□ -0.72
AP001004.1-201ENST00000582468 TSPYL2Q9H2G4 693 aaPredicted RBP10.54□□□□□ -0.72
AP001004.1-201ENST00000582468 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms