RNA–Protein interactions for RNA: ENST00000417463.1

AP000550.2-201, humanhuman

TSL 5 BASIC

Gene AP000550.2, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.2-201ENST00000417463 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
AP000550.2-201ENST00000417463 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
AP000550.2-201ENST00000417463 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
AP000550.2-201ENST00000417463 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
AP000550.2-201ENST00000417463 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
AP000550.2-201ENST00000417463 FOXD1Q16676 465 aa15.74■□□□□ 0.11
AP000550.2-201ENST00000417463 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.04
AP000550.2-201ENST00000417463 ADRA2BP18089 450 aa15.25■□□□□ 0.03
AP000550.2-201ENST00000417463 PIAS4Q8N2W9 510 aaPredicted RBP14.87□□□□□ -0.03
AP000550.2-201ENST00000417463 MSH5O43196 834 aa14.5□□□□□ -0.09
AP000550.2-201ENST00000417463 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
AP000550.2-201ENST00000417463 KCNA4P22459 653 aa14.09□□□□□ -0.15
AP000550.2-201ENST00000417463 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
AP000550.2-201ENST00000417463 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
AP000550.2-201ENST00000417463 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
AP000550.2-201ENST00000417463 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
AP000550.2-201ENST00000417463 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
AP000550.2-201ENST00000417463 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
AP000550.2-201ENST00000417463 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
AP000550.2-201ENST00000417463 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
AP000550.2-201ENST00000417463 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
AP000550.2-201ENST00000417463 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
AP000550.2-201ENST00000417463 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
AP000550.2-201ENST00000417463 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
AP000550.2-201ENST00000417463 ZBTB22O15209 634 aa12.96□□□□□ -0.33
AP000550.2-201ENST00000417463 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
AP000550.2-201ENST00000417463 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
AP000550.2-201ENST00000417463 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
AP000550.2-201ENST00000417463 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
AP000550.2-201ENST00000417463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
AP000550.2-201ENST00000417463 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
AP000550.2-201ENST00000417463 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
AP000550.2-201ENST00000417463 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
AP000550.2-201ENST00000417463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
AP000550.2-201ENST00000417463 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
AP000550.2-201ENST00000417463 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
AP000550.2-201ENST00000417463 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
AP000550.2-201ENST00000417463 APLP2Q06481 763 aa12.36□□□□□ -0.43
AP000550.2-201ENST00000417463 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
AP000550.2-201ENST00000417463 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
AP000550.2-201ENST00000417463 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
AP000550.2-201ENST00000417463 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
AP000550.2-201ENST00000417463 CAPN15O75808 1086 aa12.06□□□□□ -0.48
AP000550.2-201ENST00000417463 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
AP000550.2-201ENST00000417463 POLA2Q14181 598 aa11.93□□□□□ -0.5
AP000550.2-201ENST00000417463 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
AP000550.2-201ENST00000417463 DSG3P32926 999 aa11.87□□□□□ -0.51
AP000550.2-201ENST00000417463 ABCB7O75027 752 aa11.82□□□□□ -0.52
AP000550.2-201ENST00000417463 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
AP000550.2-201ENST00000417463 FBLN2P98095 1184 aa11.8□□□□□ -0.52
AP000550.2-201ENST00000417463 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
AP000550.2-201ENST00000417463 FKBP8Q14318 412 aa11.77□□□□□ -0.53
AP000550.2-201ENST00000417463 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
AP000550.2-201ENST00000417463 PROM2Q8N271 834 aa11.51□□□□□ -0.57
AP000550.2-201ENST00000417463 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
AP000550.2-201ENST00000417463 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
AP000550.2-201ENST00000417463 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
AP000550.2-201ENST00000417463 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
AP000550.2-201ENST00000417463 ZNF692Q9BU19 519 aaPredicted RBP11.43□□□□□ -0.58
AP000550.2-201ENST00000417463 SSUH2Q9Y2M2 353 aa11.42□□□□□ -0.58
AP000550.2-201ENST00000417463 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
AP000550.2-201ENST00000417463 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
AP000550.2-201ENST00000417463 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
AP000550.2-201ENST00000417463 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
AP000550.2-201ENST00000417463 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
AP000550.2-201ENST00000417463 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
AP000550.2-201ENST00000417463 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
AP000550.2-201ENST00000417463 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
AP000550.2-201ENST00000417463 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
AP000550.2-201ENST00000417463 IFNLR1Q8IU57 520 aaPredicted RBP11.03□□□□□ -0.64
AP000550.2-201ENST00000417463 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
AP000550.2-201ENST00000417463 MIER1Q8N108 512 aa10.98□□□□□ -0.65
AP000550.2-201ENST00000417463 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
AP000550.2-201ENST00000417463 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
AP000550.2-201ENST00000417463 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
AP000550.2-201ENST00000417463 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
AP000550.2-201ENST00000417463 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
AP000550.2-201ENST00000417463 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
AP000550.2-201ENST00000417463 KLHL34Q8N239 644 aa10.9□□□□□ -0.66
AP000550.2-201ENST00000417463 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
AP000550.2-201ENST00000417463 CREBZFQ9NS37 354 aa10.84□□□□□ -0.67
AP000550.2-201ENST00000417463 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
AP000550.2-201ENST00000417463 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.69
AP000550.2-201ENST00000417463 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
AP000550.2-201ENST00000417463 PKD2Q13563 968 aa10.74□□□□□ -0.69
AP000550.2-201ENST00000417463 NUBP1P53384 320 aa10.71□□□□□ -0.69
AP000550.2-201ENST00000417463 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
AP000550.2-201ENST00000417463 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
AP000550.2-201ENST00000417463 GSE1Q14687 1217 aa10.67□□□□□ -0.7
AP000550.2-201ENST00000417463 CHADLQ6NUI6 762 aa10.66□□□□□ -0.7
AP000550.2-201ENST00000417463 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
AP000550.2-201ENST00000417463 FARP1Q9Y4F1 1045 aaPredicted RBP10.65□□□□□ -0.7
AP000550.2-201ENST00000417463 TRIM41Q8WV44 630 aa10.64□□□□□ -0.71
AP000550.2-201ENST00000417463 CIZ1Q9ULV3 898 aaPredicted RBP10.63□□□□□ -0.71
AP000550.2-201ENST00000417463 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
AP000550.2-201ENST00000417463 FAM212AQ96EL1 285 aa10.61□□□□□ -0.71
AP000550.2-201ENST00000417463 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
AP000550.2-201ENST00000417463 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
AP000550.2-201ENST00000417463 CHRM1P11229 460 aaPredicted RBP10.53□□□□□ -0.72
AP000550.2-201ENST00000417463 RGL2O15211 777 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms