Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC004801.6-201ENST00000616571 978 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC073488.3-201ENST00000631611 778 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.59□□□□□ -1.51
COL21A1Q96P44 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 AC119674.1-202ENST00000641333 1860 ntBASIC5.59□□□□□ -1.51
COL21A1Q96P44 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL21A1Q96P44 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.59□□□□□ -1.52
COL21A1Q96P44 AC005224.3-201ENST00000584683 2140 ntBASIC5.59□□□□□ -1.52
COL21A1Q96P44 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
COL21A1Q96P44 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
COL21A1Q96P44 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AC093225.1-201ENST00000506867 1408 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 AC004076.2-201ENST00000620532 3323 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AL354854.1-201ENST00000455940 1363 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 COX6B1P3-201ENST00000312310 260 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AC068228.1-201ENST00000461723 211 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 RPL37P23-201ENST00000492641 294 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AL158068.1-201ENST00000506116 616 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 OR51A1P-201ENST00000511110 946 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AC068768.2-201ENST00000602352 343 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 AC093671.1-201ENST00000624981 2929 ntBASIC5.58□□□□□ -1.52
COL21A1Q96P44 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL21A1Q96P44 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.58□□□□□ -1.52
COL21A1Q96P44 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC008627.1-201ENST00000517511 1704 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 RN7SKP128-201ENST00000364270 303 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 U3.23-201ENST00000391132 200 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC069154.1-201ENST00000432914 542 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 AMYP1-201ENST00000440059 1023 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 SDC4P-201ENST00000453285 601 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC092865.4-201ENST00000477936 615 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 RBBP4P1-201ENST00000502424 1276 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC125612.1-201ENST00000547580 377 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC008507.3-201ENST00000585753 472 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC060780.2-201ENST00000589047 198 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 SNX18P12-201ENST00000624821 759 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms