Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 OR8B9P-202ENST00000642028 5216 ntBASIC7.89□□□□□ -1.15
NPAS3Q8IXF0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
NPAS3Q8IXF0 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NPAS3Q8IXF0 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC012360.3-201ENST00000610036 3449 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LARP1BP1-201ENST00000506036 1359 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 OR5P1P-201ENST00000299512 925 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 RNU6-253P-201ENST00000384730 105 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 MIR555-201ENST00000384987 96 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CXADRP1-201ENST00000398098 1095 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 SNORA2C-201ENST00000408564 137 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AL513185.2-201ENST00000425543 193 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 RPL7P36-201ENST00000444633 681 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 COX6CP12-201ENST00000446748 202 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 PSPHP1-201ENST00000450062 261 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC244505.3-201ENST00000454598 187 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AL133480.2-201ENST00000456723 487 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CEACAMP4-201ENST00000457676 421 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AF213884.1-201ENST00000488102 463 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 FTH1P23-201ENST00000492727 550 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC008040.4-201ENST00000494834 768 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC104090.1-201ENST00000506341 1171 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 HNRNPKP5-201ENST00000515300 253 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CUX2P1-201ENST00000606426 298 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC106782.7-201ENST00000624024 418 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC133555.5-201ENST00000624430 418 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC073488.7-201ENST00000633785 778 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC091132.4-201ENST00000587960 2262 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 MAPK10-371ENST00000641952 5209 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 CTAGE3P-201ENST00000454280 2404 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC016251.1-201ENST00000624299 4198 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 AC096745.2-201ENST00000627783 1914 ntBASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
NPAS3Q8IXF0 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 RBMX2P2-201ENST00000257020 946 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 IL6STP1-201ENST00000346911 1020 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 RNA5SP177-201ENST00000410122 107 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 GSTA10P-201ENST00000412182 576 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 287.8 ms