Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 AC023141.8-201ENST00000442554 208 ntBASIC6.99□□□□□ -1.29
COL1A1P02452 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.99□□□□□ -1.29
COL1A1P02452 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 RN7SL184P-201ENST00000488308 297 ntBASIC6.99□□□□□ -1.29
COL1A1P02452 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.99□□□□□ -1.29
COL1A1P02452 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.99□□□□□ -1.29
COL1A1P02452 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL1A1P02452 MIR1269B-201ENST00000580405 75 ntBASIC6.99□□□□□ -1.29
COL1A1P02452 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 MIR7155-201ENST00000615925 56 ntBASIC6.99□□□□□ -1.29
COL1A1P02452 AC037198.3-201ENST00000616754 526 ntBASIC6.99□□□□□ -1.29
COL1A1P02452 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 AC008115.4-201ENST00000619780 775 ntBASIC6.99□□□□□ -1.29
COL1A1P02452 YES1P1-201ENST00000418510 1628 ntBASIC6.99□□□□□ -1.29
COL1A1P02452 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.99□□□□□ -1.29
COL1A1P02452 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.99□□□□□ -1.29
COL1A1P02452 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL1A1P02452 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
COL1A1P02452 RNA5SP131-201ENST00000365452 119 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.98□□□□□ -1.29
COL1A1P02452 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.98□□□□□ -1.29
COL1A1P02452 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.98□□□□□ -1.29
COL1A1P02452 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.98□□□□□ -1.29
COL1A1P02452 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.98□□□□□ -1.29
COL1A1P02452 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 AL445687.2-201ENST00000458156 728 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 AC105384.2-201ENST00000508433 640 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 MIR2117-201ENST00000516780 80 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 AC118658.2-201ENST00000618697 459 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 C4BPAP1-201ENST00000415474 1893 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 AC114876.1-201ENST00000490962 1366 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL1A1P02452 AC012213.2-201ENST00000562917 4597 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
COL1A1P02452 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.98□□□□□ -1.29
COL1A1P02452 GAPDHP58-201ENST00000438477 1006 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.98□□□□□ -1.29
COL1A1P02452 MIR4260-201ENST00000583107 67 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 MIR8080-201ENST00000622224 89 ntBASIC6.98□□□□□ -1.29
COL1A1P02452 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.98□□□□□ -1.29
COL1A1P02452 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.98□□□□□ -1.29
COL1A1P02452 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL1A1P02452 AC005725.1-201ENST00000577346 2607 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 MFSD8-239ENST00000641590 2479 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 CASC19-248ENST00000641674 1356 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
COL1A1P02452 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL1A1P02452 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL1A1P02452 AC117409.1-201ENST00000470499 1310 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL1A1P02452 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
COL1A1P02452 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.97□□□□□ -1.29
COL1A1P02452 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 HSPD1P8-201ENST00000400121 1658 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 AC016251.2-201ENST00000623393 3089 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL1A1P02452 RNA5SP183-201ENST00000362452 119 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COL1A1P02452 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 RPS27P18-201ENST00000431701 247 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.97□□□□□ -1.29
COL1A1P02452 RPS23P1-201ENST00000491662 432 ntBASIC6.97□□□□□ -1.29
COL1A1P02452 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.97□□□□□ -1.29
COL1A1P02452 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.97□□□□□ -1.29
COL1A1P02452 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.97□□□□□ -1.29
COL1A1P02452 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.97□□□□□ -1.29
COL1A1P02452 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.97□□□□□ -1.29
COL1A1P02452 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms