Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AP000894.4-201ENST00000610185 483 ntBASIC5.76□□□□□ -1.49
TNFP01375 MIR6768-201ENST00000610734 72 ntBASIC5.76□□□□□ -1.49
TNFP01375 RN7SL544P-201ENST00000617232 284 ntBASIC5.76□□□□□ -1.49
TNFP01375 RN7SL763P-201ENST00000620922 284 ntBASIC5.76□□□□□ -1.49
TNFP01375 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.76□□□□□ -1.49
TNFP01375 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.76□□□□□ -1.49
TNFP01375 OR11H2-202ENST00000641517 1085 ntBASIC5.76□□□□□ -1.49
TNFP01375 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TNFP01375 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 AC005034.3-201ENST00000604845 1747 ntBASIC5.76□□□□□ -1.49
TNFP01375 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TNFP01375 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 RPS2P45-201ENST00000469997 2057 ntBASIC5.76□□□□□ -1.49
TNFP01375 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.76□□□□□ -1.49
TNFP01375 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
TNFP01375 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TNFP01375 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.75□□□□□ -1.49
TNFP01375 AC112243.1-201ENST00000623949 3851 ntBASIC5.75□□□□□ -1.49
TNFP01375 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TNFP01375 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.75□□□□□ -1.49
TNFP01375 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
TNFP01375 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TNFP01375 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 RNA5SP394-201ENST00000364216 119 ntBASIC5.75□□□□□ -1.49
TNFP01375 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 AL360271.1-201ENST00000395679 510 ntBASIC5.75□□□□□ -1.49
TNFP01375 HMGB1P20-201ENST00000402555 677 ntBASIC5.75□□□□□ -1.49
TNFP01375 AL451046.1-201ENST00000406097 534 ntBASIC5.75□□□□□ -1.49
TNFP01375 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.75□□□□□ -1.49
TNFP01375 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.75□□□□□ -1.49
TNFP01375 AL513325.1-201ENST00000417716 1034 ntBASIC5.75□□□□□ -1.49
TNFP01375 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.75□□□□□ -1.49
TNFP01375 HMGB3P24-201ENST00000433260 622 ntBASIC5.75□□□□□ -1.49
TNFP01375 AC002504.1-201ENST00000438281 691 ntBASIC5.75□□□□□ -1.49
TNFP01375 SUMO2P3-201ENST00000438311 288 ntBASIC5.75□□□□□ -1.49
TNFP01375 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.75□□□□□ -1.49
TNFP01375 RNU1-88P-201ENST00000459274 128 ntBASIC5.75□□□□□ -1.49
TNFP01375 AL603882.1-201ENST00000463059 681 ntBASIC5.75□□□□□ -1.49
TNFP01375 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
TNFP01375 AC022215.1-201ENST00000481770 362 ntBASIC5.75□□□□□ -1.49
TNFP01375 RPL7L1P4-201ENST00000513004 707 ntBASIC5.75□□□□□ -1.49
TNFP01375 RNA5SP116-201ENST00000516132 98 ntBASIC5.75□□□□□ -1.49
TNFP01375 IGBP1P1-201ENST00000554337 1009 ntBASIC5.75□□□□□ -1.49
TNFP01375 SNORD95-201ENST00000579879 68 ntBASIC5.75□□□□□ -1.49
TNFP01375 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.75□□□□□ -1.49
TNFP01375 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.75□□□□□ -1.49
TNFP01375 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.75□□□□□ -1.49
TNFP01375 RNA5SP440-201ENST00000612665 119 ntBASIC5.75□□□□□ -1.49
TNFP01375 AC004477.3-201ENST00000614061 590 ntBASIC5.75□□□□□ -1.49
TNFP01375 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.75□□□□□ -1.49
TNFP01375 AL049767.1-202ENST00000637826 242 ntBASIC5.75□□□□□ -1.49
TNFP01375 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.75□□□□□ -1.49
TNFP01375 AC087565.3-203ENST00000641018 837 ntBASIC5.75□□□□□ -1.49
TNFP01375 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TNFP01375 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.75□□□□□ -1.49
TNFP01375 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TNFP01375 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.75□□□□□ -1.49
TNFP01375 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TNFP01375 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TNFP01375 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFP01375 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFP01375 AL161901.1-201ENST00000624954 3425 ntBASIC5.74□□□□□ -1.49
TNFP01375 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFP01375 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
TNFP01375 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TNFP01375 SNORA70H-201ENST00000383910 135 ntBASIC5.74□□□□□ -1.49
TNFP01375 SNORA70J-201ENST00000384182 135 ntBASIC5.74□□□□□ -1.49
TNFP01375 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TNFP01375 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.74□□□□□ -1.49
TNFP01375 NME1P1-201ENST00000420914 382 ntBASIC5.74□□□□□ -1.49
TNFP01375 AC079355.1-201ENST00000421770 223 ntBASIC5.74□□□□□ -1.49
TNFP01375 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFP01375 AC127526.2-201ENST00000426436 775 ntBASIC5.74□□□□□ -1.49
TNFP01375 AL022331.1-201ENST00000429025 477 ntBASIC5.74□□□□□ -1.49
TNFP01375 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFP01375 RPS17P15-201ENST00000475609 349 ntBASIC5.74□□□□□ -1.49
TNFP01375 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.74□□□□□ -1.49
TNFP01375 AC008945.1-201ENST00000505144 499 ntBASIC5.74□□□□□ -1.49
TNFP01375 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.74□□□□□ -1.49
TNFP01375 SCARNA6.1-201ENST00000516989 238 ntBASIC5.74□□□□□ -1.49
TNFP01375 SNORA43.3-201ENST00000517240 103 ntBASIC5.74□□□□□ -1.49
TNFP01375 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms