Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 CLUHP10-201ENST00000631979 980 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 AC073488.6-201ENST00000632293 754 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SSSCA1O60232 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 MTCO1P28-201ENST00000574177 1528 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.66□□□□□ -1.66
SSSCA1O60232 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.66□□□□□ -1.66
SSSCA1O60232 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSSCA1O60232 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SSSCA1O60232 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSSCA1O60232 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSSCA1O60232 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 OR52N3P-201ENST00000413417 934 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AL136231.1-201ENST00000429407 730 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AC002553.3-201ENST00000453002 341 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 OR7E22P-201ENST00000478335 1035 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.66□□□□□ -1.66
SSSCA1O60232 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.66□□□□□ -1.66
SSSCA1O60232 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AC068408.1-201ENST00000577406 1144 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 AP005136.2-201ENST00000583253 1049 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.66□□□□□ -1.66
SSSCA1O60232 OR7E19P-202ENST00000589942 844 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.66□□□□□ -1.66
SSSCA1O60232 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 LSM1P2-201ENST00000604911 322 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AC010632.3-201ENST00000611377 369 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSSCA1O60232 AL442128.2-201ENST00000620246 1824 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.66□□□□□ -1.66
SSSCA1O60232 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.66□□□□□ -1.66
SSSCA1O60232 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSSCA1O60232 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSSCA1O60232 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSSCA1O60232 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
SSSCA1O60232 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSSCA1O60232 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.65□□□□□ -1.66
SSSCA1O60232 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.65□□□□□ -1.66
SSSCA1O60232 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSSCA1O60232 HSPD1P7-201ENST00000447985 1686 ntBASIC4.65□□□□□ -1.66
SSSCA1O60232 MUC2-202ENST00000613187 4845 ntBASIC4.65□□□□□ -1.66
SSSCA1O60232 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSSCA1O60232 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSSCA1O60232 AL121886.1-201ENST00000358609 435 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 RNA5SP77-201ENST00000365394 120 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSSCA1O60232 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSSCA1O60232 AL358178.1-201ENST00000407698 397 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 HYALP1-201ENST00000417674 1279 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.65□□□□□ -1.67
SSSCA1O60232 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.65□□□□□ -1.67
SSSCA1O60232 REREP1Y-201ENST00000422655 198 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 AL138479.1-201ENST00000426913 484 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 TMEM183AP1-205ENST00000432739 290 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 REREP2Y-201ENST00000439103 200 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 RPS18P1-201ENST00000447840 458 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 SNORD125-201ENST00000459538 96 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSSCA1O60232 AC015524.1-201ENST00000491585 472 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 RPS17P5-201ENST00000498293 408 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.65□□□□□ -1.67
SSSCA1O60232 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.65□□□□□ -1.67
SSSCA1O60232 CR383658.1-201ENST00000514609 734 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.65□□□□□ -1.67
SSSCA1O60232 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.65□□□□□ -1.67
SSSCA1O60232 AL359219.2-201ENST00000555184 348 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.65□□□□□ -1.67
SSSCA1O60232 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.65□□□□□ -1.67
SSSCA1O60232 RPSAP75-201ENST00000605848 301 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.65□□□□□ -1.67
SSSCA1O60232 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.65□□□□□ -1.67
SSSCA1O60232 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms