Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC138409.2-202ENST00000507274 458 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC090826.1-203ENST00000569235 490 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC008507.3-201ENST00000585753 472 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC092266.1-201ENST00000610958 165 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 RFPL4AP6-201ENST00000616792 846 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AP001885.1-201ENST00000621658 558 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 LPAL2-203ENST00000454031 2498 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC010624.4-201ENST00000597606 1351 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 RNA5SP188-201ENST00000362916 129 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 RN7SKP275-201ENST00000364626 301 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 RN7SKP15-201ENST00000364742 309 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 LCN1P2-201ENST00000372030 223 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 NME1P1-201ENST00000420914 382 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 CYCSP52-201ENST00000422857 310 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 Z80107.1-201ENST00000436830 412 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 DNAJA1P5-201ENST00000440278 943 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 MTCYBP11-201ENST00000447254 1109 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 VPS25P1-201ENST00000455691 508 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC023194.2-201ENST00000465398 406 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC093801.2-201ENST00000503966 1050 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 RN7SKP35-201ENST00000517210 151 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC027369.2-201ENST00000528030 440 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC036111.2-201ENST00000533247 901 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC092332.1-201ENST00000563684 829 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC040174.2-201ENST00000602701 465 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 OR4H6P-202ENST00000603819 340 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AP001823.1-201ENST00000604056 1003 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AC013244.3-201ENST00000605614 388 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 RPL12P48-201ENST00000605620 304 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AL365181.4-201ENST00000609800 547 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AP003485.1-201ENST00000625093 753 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.29□□□□□ -1.24
CTDP1Q9Y5B0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AC018628.1-201ENST00000624147 3819 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 FAM32BP-201ENST00000344033 333 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 RN7SKP108-201ENST00000411367 328 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 RPS7P8-201ENST00000418311 581 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 KIF4CP-201ENST00000422742 1279 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 ATP5LP2-201ENST00000440646 311 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AL590004.3-202ENST00000445883 451 ntBASIC7.28□□□□□ -1.24
CTDP1Q9Y5B0 AC097463.1-201ENST00000447288 481 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms