Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 AC137695.1-201ENST00000604126 489 ntBASIC6.14□□□□□ -1.43
HTTP42858 TCL6_3.1-201ENST00000619064 137 ntBASIC6.14□□□□□ -1.43
HTTP42858 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.14□□□□□ -1.43
HTTP42858 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HTTP42858 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.13□□□□□ -1.43
HTTP42858 COL6A4P1-202ENST00000487147 4317 ntBASIC6.13□□□□□ -1.43
HTTP42858 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.13□□□□□ -1.43
HTTP42858 RPL36AP15-201ENST00000444514 266 ntBASIC6.13□□□□□ -1.43
HTTP42858 AL512782.1-201ENST00000603093 364 ntBASIC6.13□□□□□ -1.43
HTTP42858 AC103792.1-201ENST00000603591 919 ntBASIC6.13□□□□□ -1.43
HTTP42858 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
HTTP42858 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.13□□□□□ -1.43
HTTP42858 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.13□□□□□ -1.43
HTTP42858 MIR1193-201ENST00000408109 78 ntBASIC6.13□□□□□ -1.43
HTTP42858 AC007064.3-201ENST00000422608 359 ntBASIC6.13□□□□□ -1.43
HTTP42858 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.13□□□□□ -1.43
HTTP42858 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.13□□□□□ -1.43
HTTP42858 HMGB1P40-201ENST00000525121 540 ntBASIC6.13□□□□□ -1.43
HTTP42858 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.13□□□□□ -1.43
HTTP42858 AP006289.1-201ENST00000538089 277 ntBASIC6.13□□□□□ -1.43
HTTP42858 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.13□□□□□ -1.43
HTTP42858 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.13□□□□□ -1.43
HTTP42858 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.13□□□□□ -1.43
HTTP42858 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HTTP42858 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
HTTP42858 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HTTP42858 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HTTP42858 AC004975.1-201ENST00000428733 208 ntBASIC6.12□□□□□ -1.43
HTTP42858 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.12□□□□□ -1.43
HTTP42858 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.12□□□□□ -1.43
HTTP42858 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 MIR4737-201ENST00000583979 81 ntBASIC6.12□□□□□ -1.43
HTTP42858 AC022164.1-201ENST00000568767 2673 ntBASIC6.12□□□□□ -1.43
HTTP42858 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HTTP42858 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 RNU4-2-201ENST00000365668 141 ntBASIC6.12□□□□□ -1.43
HTTP42858 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HTTP42858 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.12□□□□□ -1.43
HTTP42858 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.12□□□□□ -1.43
HTTP42858 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.12□□□□□ -1.43
HTTP42858 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.12□□□□□ -1.43
HTTP42858 AC026402.1-201ENST00000513642 170 ntBASIC6.12□□□□□ -1.43
HTTP42858 TPM3P3-201ENST00000521343 354 ntBASIC6.12□□□□□ -1.43
HTTP42858 UBE2FP2-201ENST00000566646 462 ntBASIC6.12□□□□□ -1.43
HTTP42858 MIR4277-201ENST00000578298 84 ntBASIC6.12□□□□□ -1.43
HTTP42858 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 AC116631.1-202ENST00000640984 683 ntBASIC6.12□□□□□ -1.43
HTTP42858 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 MR1-205ENST00000434571 7479 ntTSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HTTP42858 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.12□□□□□ -1.43
HTTP42858 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 RPL7L1P3-201ENST00000455249 689 ntBASIC6.12□□□□□ -1.43
HTTP42858 AC091180.1-201ENST00000462104 372 ntBASIC6.12□□□□□ -1.43
HTTP42858 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.12□□□□□ -1.43
HTTP42858 MRPS33P2-201ENST00000507850 322 ntBASIC6.12□□□□□ -1.43
HTTP42858 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.12□□□□□ -1.43
HTTP42858 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.12□□□□□ -1.43
HTTP42858 SS18L2P2-201ENST00000583960 235 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms