Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC6P09630 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC6P09630 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC6P09630 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC6P09630 MTND4LP12-201ENST00000448237 295 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 RAB28P2-201ENST00000454299 641 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC011225.1-201ENST00000457751 369 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC104164.1-201ENST00000460282 590 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 RN7SL184P-201ENST00000488308 297 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC6P09630 BX510359.5-201ENST00000515651 304 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 RNU6-615P-201ENST00000516065 106 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC6P09630 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC6P09630 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC024589.2-201ENST00000605642 1294 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 AC145423.1-201ENST00000605712 336 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC007683.2-201ENST00000624681 714 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.74□□□□□ -1.33
HOXC6P09630 AC003992.1-201ENST00000635364 557 ntBASIC6.74□□□□□ -1.33
HOXC6P09630 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
HOXC6P09630 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC6P09630 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC6P09630 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC6P09630 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HOXC6P09630 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC6P09630 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC6P09630 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 LINC01616-201ENST00000561816 2280 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 SPTLC1P2-201ENST00000407089 121 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 PTCD2P2-201ENST00000415579 1095 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 RPL6P21-201ENST00000418672 846 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 AL022331.1-201ENST00000429025 477 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 DEFA9P-201ENST00000433042 285 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 EEF1B2P6-201ENST00000445713 673 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.73□□□□□ -1.33
HOXC6P09630 AC023818.1-201ENST00000498379 384 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 AC109481.1-201ENST00000509173 282 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 TRAV11-201ENST00000539512 339 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.73□□□□□ -1.33
HOXC6P09630 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC6P09630 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC6P09630 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.73□□□□□ -1.33
HOXC6P09630 AL139099.4-201ENST00000614802 114 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.73□□□□□ -1.33
HOXC6P09630 AC006213.5-201ENST00000619673 288 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 AC004808.2-201ENST00000627965 773 ntBASIC6.73□□□□□ -1.33
HOXC6P09630 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HOXC6P09630 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.73□□□□□ -1.33
HOXC6P09630 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC6P09630 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC6P09630 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC6P09630 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC6P09630 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC6P09630 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HOXC6P09630 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC6P09630 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC6P09630 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC6P09630 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HOXC6P09630 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms